Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00256 ATGGAGGAAGTTGAAGACAAGCCACCCTCAGAACAATCTATAATAAGGGCTGAGCAGAAGCCACTGGCAGAAACCCCTGAAGAAAACACTGAGGTGATGAATCCACCCAATAATCAGTCTTCCATTGAAGTTTTGGATCAACATAGTAATAATAACAGTAGAATGAAGTCTGGCACTCGTTTTCCCATGGAGTTCTCTGACTTAGAAGTGTCCCTAAATGCTTCCCATCAAACTATAGCACAAGTTGAACATCTTCCCACAGGTGATTCAGCTTCTACTCCTGAAGCTACAATTCGTGGAACAGAAGAAAGCCACCAAGGAGCCAAGGCTGCAGATTCTGAACCAGGAGCTTTAGAAGAAGGTATCTTCAACAGGCAGGAGGAAGGCGTTTCTGCTGCCACTGCTAGCAGTGATGTTGATAATCTGATGAATCCCTCAACATCATATTCTGAAACAAAAGAGTTGCAGACTGGCCCCATAGAACTAATAACAGACTCACCTCAAACCATGGTTGCTGATGTTGCCATAGATAATTCTGCTTCAACCTCAAAAGTTGCTGTTCATGTAAAGGAACAAAGCAACCAAGGAGCCATGTCTGCAAATTCTGAAGCCGGAGCATTAGAAGATATGTCAAATAGGCAACAGGGTAGTGGTTATAGTGTCTGTGCTGGCAGTGATGCTGATAATCAGATGGAACCCTCAACTTACTCTTTTAAGGAAAAAGAGTTGCAGAATGACCACAAAGAACTAAAGATTAATTCACCTCAAAAAATGGATACTGATGTTGTTGTAGGAGCTGTTGGCTCACATGCTGTTGCTGCTGGCAACGGTGTTGATAACTCTTCAGAAAAAATAGAGTCGCAAAATGATGACGAAGAGCTAAAGATTGAACTGCCTCAAACCAAGATAGCTGATGTGTCTGTGGAAGCTGTTGACTCACCTGCTGCCAGTGATCAAATGGCTTCCTCTTCTGAAGAAATAGAGTTGCAGAATGACCAGAAAGAACAAAAGACAGATCCGTCTCAAACCAATATTATTGATGTTACTTTGAGAGCTGATGATCCACCATCTGCCAGTGATGATAGTCAGATAAAACTCTTGGATTCCTCTTGTGAAAAAATAGAGTTGCAGAATGACCAGGAAAAACAGAAGACAGATCCATCTCAAACCAATGTTACTGATACTTCTGTGGGAGCCATTGACTCACCTACTTATGCCAAGCAGATGGCTGCAAGAAGAAGCCATATTGATACAGCATCTCCATTTGAATCAGTGAAGGAAGCTGTTTCAAAGTTTGGAGGCATTGTGGATTGGAAGGCTCACAGAATCCAGACAGTGGAGAGACGCAAACATGTAGAACATGAACATGAAAAGGCACAGCAGCTGATCCCAGACTTTAGAAAAAAAGCCGAGGCTGCAGAGAAAGCCAAAATGCAAGTACTGCAGGAGCTGGATACCACTAAGAGACTAATAGAAGAGCTTAAACTTAACCTTGAGAGGGCTCAAACAGAAGAGCGTCAGGCAAGACAAGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAAGGTATTGCAGATGACTCTAGTGTTGCAGCCAAGGCACAGCTTGAGGTAGCTAGAGCTAGGTATACATCAGCAATCACAGAGTTAACATCAATAAAAGAAGAGTTGGATGCATTGCGTGGAGAATATGCATCCTTAGTTGATGAAAAAGAGGAAGCTGTCAAGAAATCTGAAGAGGCTGTTGCTTCATCAAAGCAAGTAGAGAAGACAGTGGAAGACTTGACTATTGAGCTGATTGCAACAAAGGAGGCACTGGAAACTGCACATGCTGCACACATGGAAGCAGAGGAACAGAGAATAGGGACAGTCATGGCAAGAGATCAGGATTGTCTCAGTTGGGAGAAGGAACTGAAACATGCAGAAGAAGAACTCCAGAGTCTCAACCAGAAAATTTTGTCTGCTAAGGATCTCAAATCTAAATTGAACACAGCCTCAGCTTTGCTGCTTGATTTGAAAGCTGAATTAAATGTTTATATGGAATCAAAGGCTGACCCAGATGGTGAAGGAGAAGGAGTCTCCAAAGGAGTGCCAGAGAAGAAGACACACAGTGAAATACAAGAAGCAGTTGCATCCGCCAAAAAGGAACTTGAGGAAGTGAAGCTTAACATAGAGAAAGCTACCACTGAGATAAATTACTTAAGGGTGGCCGCGGCGTCCTTAAAATCAGAACTTGAAAATGAGAAATCATTTGTTGCCTCCATCAGGCAAAGAGAGGGAATGGCCTCCATCACAGCTGCATCTCTTGAAGCTGAACTGCAGAACACTAAATCAGAAACGGTTTTGATTCAGATGAAGGAAAAGGAAGGCAGAGAGAAAATTGCTGTGCTACCAAAGAAACTACAGAAAGAAGTTGAAGAGAATAATCAGGCCAAGTTGCTTGCTCAAGCAGCTCGTGAAGAGTTGCAGAGAGTAAAGGAGGAGGCTGAACAAGTAAAGGCCAGTGCAAGCACAATGCAAAGCAAATTACTAGCAGCTCAAAAGGAGATAGAAGCTGCGAGAGCTTCTGAAAGGTTGGCAATAGCAGCAACTAAAGCATTGCAAGAGAGTGAGGCATCACCTATGAACAACAGTGAAGTGGATTCATCCACTTGGGTGACACTTTCGGTGGAGGAGTACTATAATCTCAGCAAACAAGCACATGATGCAGAAAAAGAATCCAGCATGAGGGTTGCAACAGCTAATTCTGAAATTGAGATAGCCAAGAAGTCTGAATTGAGAACCTTGGAGAGGTTGAATAGTGTGAGTAGAGAGATGGCTGCTAGAAGGGAATCTCTTAAGATCGCCATGGAGAAAGCTGAAAAGGCGAGGGAGGGAAAATTAGGTGTAGAACAAGAACTAAGAAAATGGAGGGCAGATCATGAACAACGAAGAAAGGCTGGTGCATTAGGCCAAGAATTGGTTAAGCATCAAAGTAGTAAAAGTTCAGACGCTAGTTTTGAAAGACACAAGGAACCAAACAGTTTAGAAAAACCTCATCGTGTACCTATTCCTCTTCGTTACTTCTCCAGTTCAAAGTCTTATGTCCATTCAAACGGTGGAGCTGTGTCATCAACAGAAGGAAAAACCGTAAAGAAGAAGAAGAAATCATTTTTCCCATGGGTTTTGATGTTTTTTGGGAAGAAAAAGTCGCACACAACACATTCAGGGTAA 3219 0.4275 MEEVEDKPPSEQSIIRAEQKPLAETPEENTEVMNPPNNQSSIEVLDQHSNNNSRMKSGTRFPMEFSDLEVSLNASHQTIAQVEHLPTGDSASTPEATIRGTEESHQGAKAADSEPGALEEGIFNRQEEGVSAATASSDVDNLMNPSTSYSETKELQTGPIELITDSPQTMVADVAIDNSASTSKVAVHVKEQSNQGAMSANSEAGALEDMSNRQQGSGYSVCAGSDADNQMEPSTYSFKEKELQNDHKELKINSPQKMDTDVVVGAVGSHAVAAGNGVDNSSEKIESQNDDEELKIELPQTKIADVSVEAVDSPAASDQMASSSEEIELQNDQKEQKTDPSQTNIIDVTLRADDPPSASDDSQIKLLDSSCEKIELQNDQEKQKTDPSQTNVTDTSVGAIDSPTYAKQMAARRSHIDTASPFESVKEAVSKFGGIVDWKAHRIQTVERRKHVEHEHEKAQQLIPDFRKKAEAAEKAKMQVLQELDTTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADDSSVAAKAQLEVARARYTSAITELTSIKEELDALRGEYASLVDEKEEAVKKSEEAVASSKQVEKTVEDLTIELIATKEALETAHAAHMEAEEQRIGTVMARDQDCLSWEKELKHAEEELQSLNQKILSAKDLKSKLNTASALLLDLKAELNVYMESKADPDGEGEGVSKGVPEKKTHSEIQEAVASAKKELEEVKLNIEKATTEINYLRVAAASLKSELENEKSFVASIRQREGMASITAASLEAELQNTKSETVLIQMKEKEGREKIAVLPKKLQKEVEENNQAKLLAQAAREELQRVKEEAEQVKASASTMQSKLLAAQKEIEAARASERLAIAATKALQESEASPMNNSEVDSSTWVTLSVEEYYNLSKQAHDAEKESSMRVATANSEIEIAKKSELRTLERLNSVSREMAARRESLKIAMEKAEKAREGKLGVEQELRKWRADHEQRRKAGALGQELVKHQSSKSSDASFERHKEPNSLEKPHRVPIPLRYFSSSKSYVHSNGGAVSSTEGKTVKKKKKSFFPWVLMFFGKKKSHTTHSG 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00256 1072 MobiDBLite consensus disorder prediction 30 59 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 284 299 - -
Phco2g00256 1072 Coils Coil 938 958 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 685 706 - -
Phco2g00256 1072 Coils Coil 803 844 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 974 1015 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 997 1013 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 192 257 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 77 100 - -
Phco2g00256 1072 Coils Coil 633 677 - -
Phco2g00256 1072 Coils Coil 705 739 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 192 238 - -
Phco2g00256 1072 Pfam Weak chloroplast movement under blue light 414 979 IPR008545 -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 272 345 - -
Phco2g00256 1072 Coils Coil 456 520 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 129 158 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 383 398 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 239 255 - -
Phco2g00256 1072 Coils Coil 552 590 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 371 398 - -
Phco2g00256 1072 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 415 1055 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 77 158 - -
Phco2g00256 1072 Coils Coil 364 384 - -
Phco2g00256 1072 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00256 Phco-Chr2 1980504 1984326 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00256 2 1980504 1984326 Phco2g00256 2 1980504 1984326 ECH
Phco2g00256 2 1980504 1984326 Phco7g00450 7 3225319 3229229 PCT