Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00252 ATGCCTGTGATCATCCCTCGTAACCAACCACTAAGGATAATACCCGCGTCGGGTATAAATGGAAAACAGTTACCTGAAAATGTCATGATGCAGAAAATAATGGAAAAGTTGAAAGAAGCAGACAGAGACAAAGATGGTTGTTTCAACAAGAATGAACTCAAGCATGCCCTCAAAGACTTGGGTGCCTTCTTCCCTGGCTGGAGAGCCGACCGTGCTTTTGGAAAAGTTGATATCAACAACGACGGTCAAATTAGCGGCGAGGAAATCGACTCTCTCCTTGAGTATCTTCGTTCTTGCGGGTTTGGAAAATGA 312 0.4423 MPVIIPRNQPLRIIPASGINGKQLPENVMMQKIMEKLKEADRDKDGCFNKNELKHALKDLGAFFPGWRADRAFGKVDINNDGQISGEEIDSLLEYLRSCGFGK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00252 103 SMART efh_1 32 60 IPR002048 GO:0005509
Phco2g00252 103 SMART efh_1 68 96 IPR002048 GO:0005509
Phco2g00252 103 CDD EFh 32 88 IPR002048 GO:0005509
Phco2g00252 103 ProSitePatterns EF-hand calcium-binding domain. 77 89 IPR018247 -
Phco2g00252 103 ProSiteProfiles EF-hand calcium-binding domain profile. 28 63 IPR002048 GO:0005509
Phco2g00252 103 Pfam EF-hand domain pair 31 89 IPR002048 GO:0005509
Phco2g00252 103 ProSiteProfiles EF-hand calcium-binding domain profile. 68 99 IPR002048 GO:0005509
Phco2g00252 103 Gene3D - 16 98 - -
Phco2g00252 103 SUPERFAMILY EF-hand 26 92 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00252 Phco-Chr2 1957479 1957790 Tandem