Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00248 ATGGCTGCCAGGAGTGAACACCAAACGGTTCCTCTTTCGGTGCTCCTGAAGCGTGAATTGGCTCATGAGAAAATTGAGAATCCTGAGATTGTTCATGGTCAAGCTTGCCAAAGCAAGAAAGGGGAGGATTTAACACTGATTAAAGCAGAATGCCAAAGGATGGTGGGGGATGGGGTCTCTACATATTCAGTTTTTGGGATGTTTGATGGACACAATGGATCTGCCGCTGCTATTTATACTAAGGAGAATCTTCTAAATAACGTTTTAAGCGCGATTCCTCCAGATCTTAACAGAGATGAGTGGATAGCAGCATTACCCAGGGCTTTAGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAGTCTGGAACAACTGTCACCTTTGTGATTATAGAAGGTTGGGTTGTAACAGTGGCATCAGTTGGCGATTCCCGTTGTGTACTTGAATCTTCTGATGGTGAGATTTATTACTTGTCTGCAGATCACAGGCTAGACACGAATGAAGAGGAAAGGGTGCGGATCACCTCTAGCGGTGGTGAAGTTGGTCGGCTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGTTTGTGTCTCTCGCGATCTATTGGAGATATGGATGTTGGTGAATTTATTGTCCCTGTACCGCATGTAAAGCAAGTGAAGTTGCCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATTCTCTACCTGCAGAAGTAGCCCTTGATTGTTGTCGTGGCATGTCACCTGATGCCGCAGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATCGTTGTTGATATATTACATCAAGAGAAGCCATCTGTTTCTGCAGCACAAACAAGGAGGCCGGTAAAAGGAATGCTCAAGTCCATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTGTAACGACAAAGAGTACGCTGAGCCAGATGTTGTAGAGGAATTGTATGAAGAAGGATCTGCCATGCTTTCTGAGAGGTTCGATACTAAATATCCAGTCTGCAACATGTTTAAGTTGTTTATGTGTGCTGTATGTCAAGTAGAGATAAAACCTGGAGAGGGCATTTCAATACATGAGGGTGCACCCAACTCTACAAAATTTCGTCCCTGGGACGGACCTTTCCTGTGCTCGAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATTAGGTAGACTTAGCAGTGGAAGTGACGACTGA 1287 0.4468 MAARSEHQTVPLSVLLKRELAHEKIENPEIVHGQACQSKKGEDLTLIKAECQRMVGDGVSTYSVFGMFDGHNGSAAAIYTKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGEIYYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLPTAGGRLVICSDGVWDSLPAEVALDCCRGMSPDAAAPHIVKEAVQAKGLRDDTTCIVVDILHQEKPSVSAAQTRRPVKGMLKSMFRKKSSESSSCNDKEYAEPDVVEELYEEGSAMLSERFDTKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGAPNSTKFRPWDGPFLCSSCQEKKEAMEGKRSLGRLSSGSDD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00248 428 ProSiteProfiles PPM-type phosphatase domain profile. 41 293 IPR001932 -
Phco2g00248 428 Pfam Protein phosphatase 2C 54 277 IPR001932 -
Phco2g00248 428 SMART PP2C_SIG_2 42 293 IPR001932 -
Phco2g00248 428 FunFam probable protein phosphatase 2C 12 32 299 - -
Phco2g00248 428 CDD PP2Cc 39 293 IPR001932 -
Phco2g00248 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Phco2g00248 428 Gene3D - 30 302 IPR036457 -
Phco2g00248 428 PANTHER PROTEIN PHOSPHATASE 35 292 IPR015655 GO:0004722|GO:0006470
Phco2g00248 428 SMART PP2C_4 21 291 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00248 Phco-Chr2 1908267 1911835 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00248 2 1908267 1911835 Phco2g00248 2 1908267 1911835 ECH
Phco2g00248 2 1908267 1911835 Phco7g00443 7 3178794 3182569 PCT