Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00239 ATGGAGAGATCAAAATCATCCGTTGAACAAATTCAGCCTCCAACTTATGGAAACTTAGTGACCATTCTTAGCATCGATGGTGGTGGCATCAGGGGCATCATCCCCGCCACCATTATTGATTTCCTTGAGTCTCAGCTTCAGGAGTTGGATGGTCCAGAGGCAAGGCTTGCAGATTACTTTGATGTGATTTCAGGAACAAGCACAGGAGGTCTTGTAACAGCCATGCTAACTGCTCCAGACAACAACCATCGACCACTTTTTGCTGCCAAAGACATCAAGCCCTTTTACTTGGAACACGGTCCTAAGATTTTCCCACAGCACAGTGGCCTTGGTGGGACTATAATAGCAAACTTAGTAAGATCTTTGGGAGGACCAAAATACGATGGGAAATACCTTCATGAGGTGGTGAGAGAGAAACTTGGAGAGATTCGATTGCACGACACTCTCACCAACGTTGTGATTCCCACCTTCGACATCAAGTCTATGCAACCCATTCTTTTTTCTTCTTATCAGATGAAGAAGTGTTCTTACATGGATGCTAAACTCTCAGACATCTGCATAAGCACTTCCGCTGCACCTACTTATCTGCCTGCACACAGTTTCAGTAACCAAGGCTCCGAAGGGAACGTACACCAATTCAATCTCATTGATGGCGGCGTTTGTGCAAATAACCCGACCCTAGTAGCCATGAACGAAGTTACAAAGCAAATCATCAAGCAAAACTCAGATTTCTTTCCCATCAAGCCTCTGGAATATAGTCGGTTCCTAATAATTTCAATAGGCACTGGGACAGCAAAAAATGAGGAAAAATTCAATGCTCAAACTGCAGCAAAATGGGGTTTATTGGATTGGCTAACCTACAATGGCAGTACTCCATTGACTGATGTTTTCACTCAATCGAGCGCAGACATGGTTGATTTCCATTTATCTGCTGTGACTCAAGCACTTCACTCAGAAGATAATTACCTTCGAATTCAGGATGACACCTTGAGTGGAACGGATTCTTCAGTTGACATTGCTACGAAGGAGAATCTGCAGAAGCTTAGTGAGATTGGTGAAAATCTGTTGAAGAAATCAGTCTCTAGGGTCAATTTAGAGAATGGTCTCTTTGAGCCACTCACAAACGGGGAAACTAATCAACACGCTCTCACAAGGTTTGCCAAAATACTCTCGCAGGAGAGGAGGCTCCGTCAAATGAGATCTCCACACACAAATAAGAAGCCCGTCTTCTAG 1233 0.4396 MERSKSSVEQIQPPTYGNLVTILSIDGGGIRGIIPATIIDFLESQLQELDGPEARLADYFDVISGTSTGGLVTAMLTAPDNNHRPLFAAKDIKPFYLEHGPKIFPQHSGLGGTIIANLVRSLGGPKYDGKYLHEVVREKLGEIRLHDTLTNVVIPTFDIKSMQPILFSSYQMKKCSYMDAKLSDICISTSAAPTYLPAHSFSNQGSEGNVHQFNLIDGGVCANNPTLVAMNEVTKQIIKQNSDFFPIKPLEYSRFLIISIGTGTAKNEEKFNAQTAAKWGLLDWLTYNGSTPLTDVFTQSSADMVDFHLSAVTQALHSEDNYLRIQDDTLSGTDSSVDIATKENLQKLSEIGENLLKKSVSRVNLENGLFEPLTNGETNQHALTRFAKILSQERRLRQMRSPHTNKKPVF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00239 410 FunFam Patatin 12 402 - -
Phco2g00239 410 Pfam Patatin-like phospholipase 23 230 IPR002641 GO:0006629
Phco2g00239 410 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 230 IPR002641 GO:0006629
Phco2g00239 410 Gene3D Cytosolic phospholipase A2 catalytic domain 9 402 - -
Phco2g00239 410 SUPERFAMILY FabD/lysophospholipase-like 18 367 IPR016035 -
Phco2g00239 410 PANTHER XYLOSE ISOMERASE 5 399 - -
Phco2g00239 410 CDD Pat17_isozyme_like 17 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00239 Phco-Chr2 1859808 1861508 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00239 2 1859808 1861508 Phco2g00239 2 1859808 1861508 ECH