Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00238 ATGGCAGCAATGAAAGAACAAGTATCTCCAACTCCAAGAGAAATTGATGACAGACACCTTGTTACTTTGCTCAGTATTGATGGTGGTGGAATTCGGGGAATCATTCCTGGAATCATTCTTGGTTTCCTCGAATCAGAGCTTCAGGAGCTAGATGGTGATGATGTAAGATTAGCAGACTATTTTGATGTGATTGCAGGAACAAGTACAGGGGGATTGGTCACTGCAATGCTCACTGCTCCAGATCAAAATAATCGACCCTTGTATGCAGCCAAAGATCTTAAGGGTTTCTACCTTGATCATTGTCCAAAAATCTTCCAACAGAATAAGTGCTGGAATGTAATAGCGTCTGTCATGAAGTTCAATAGAACTTTGTTTGGACCACAGTACGATGGCAAGTATTTACACAAGCTTATTAGGGAAAAACTAGGCGACACAAGGTTGCACCAGACATTGACCAATGTTGTCATTCCAGCATTTGACATCAAACGCCTTCAACCTACCATCTTTTCCAGCTTCCAGTTGAAGAAGAGGCCAGATTTGAACGGGTTGTTGTCGGATATATGCATTTCAACTTCAGCAGCTCCAACCTATCTTCCAGCTCATTGCTTTGAAACCAAAACCCACCATGGTGAGGTCATGGGCAACTTTGACCTAATAGATGGTGGGGTCGCAGCAAATAACCCGACACTGGTGGCCATGTCAGAAGTCACAAACAAAATTTCCCATGAAGGGCCATGTGACATCTTGAACGTGGAAGCGATGCAATACGATAGGTTTTTGGTGATATCATTGGGAACAGGTTCTCAGAAACAGGAACCGAAATACAGTGCTAAAGATGCAGCTGAATGGGGTACCTTGAGTTGGGTTTCCCCTTTAATTGATGCCTTTGGTCAAGCCAGTTCTGACATGGTTGACTTTCACATCTCTTCAGTTTTTCGAGCACTCAATTCTGAACACAACTACCTCCGAATCCAGGACGATACATTAACTGGGAACTTATCTTCTGTGGACTTGGCCACGGAGGAGAATTTGCTGCAACTGGTCGCAGTTGGGGAATCACTGTTAAAGAAACCAGTTTCAAAGATTAACTTCAAAACTGGCCTTTATGAATCTTCTGATTCTTCTGAAACAAACGAAGAGGCCTTGAAGAGGTTTGCGAAACGACTATCCAAACAGAAGCGATTTCGTAAATCTCAATTGTATGCAAATAATGGAAATCCTTAA 1224 0.4265 MAAMKEQVSPTPREIDDRHLVTLLSIDGGGIRGIIPGIILGFLESELQELDGDDVRLADYFDVIAGTSTGGLVTAMLTAPDQNNRPLYAAKDLKGFYLDHCPKIFQQNKCWNVIASVMKFNRTLFGPQYDGKYLHKLIREKLGDTRLHQTLTNVVIPAFDIKRLQPTIFSSFQLKKRPDLNGLLSDICISTSAAPTYLPAHCFETKTHHGEVMGNFDLIDGGVAANNPTLVAMSEVTNKISHEGPCDILNVEAMQYDRFLVISLGTGSQKQEPKYSAKDAAEWGTLSWVSPLIDAFGQASSDMVDFHISSVFRALNSEHNYLRIQDDTLTGNLSSVDLATEENLLQLVAVGESLLKKPVSKINFKTGLYESSDSSETNEEALKRFAKRLSKQKRFRKSQLYANNGNP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00238 407 SUPERFAMILY FabD/lysophospholipase-like 21 368 IPR016035 -
Phco2g00238 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 233 IPR002641 GO:0006629
Phco2g00238 407 Pfam Patatin-like phospholipase 24 233 IPR002641 GO:0006629
Phco2g00238 407 PANTHER XYLOSE ISOMERASE 17 398 - -
Phco2g00238 407 Gene3D Cytosolic phospholipase A2 catalytic domain 13 401 - -
Phco2g00238 407 FunFam Patatin 13 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00238 Phco-Chr2 1854083 1857072 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00238 2 1854083 1857072 Phco2g00238 2 1854083 1857072 ECH
Phco2g00238 2 1854083 1857072 Phco7g00435 7 3105496 3108067 PCT