Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00228 ATGAATCCAATGTTGTCAATGAAAGTTCTTGTGTGGTTCATGTTTTTGTCTTGGTGCCACTTTGCCATCCCATGCGAGGCCAACCAACAAGGGGAATATCTCTACAAGTTAATTCGATCAAAGAGGGGTGAGAAAGTGAGCTCGGAAGAAGCTTCAATGGCCAAAAATATTGGTGATGGAGATTTTTGGAAGGTTGAGGAAGAAAGGGTGTTGATGGAAGATGACAAGGTGAAGGGTTTGCCGGGAGAACCAGAAGGGGTGGATTTTGATCAGTATGGTGGCTATGTAACTGTGGATGCCAAAGCAGGGAGAAGACTGTTCTACTATTTTGTCGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTGTGGCTCAATGGAGGGCCTGGCTGCTCTTCCCTTGGATATGGAGCCATGCAAGAATTAGGACCTTTCAGAGTGAACAGTGATGGAAGAACCCTTCGCAAAAATGAATATGCATGGAACAATGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTTGGATTTTCATATTCAAACACTTCTTCTGACTACTCTAACAGTGGAGACAAGAGCACAGCCATGGACTCTTACACTTTTCTCATAAACTGGCTCCACAGATTTCCACACTACAAATCTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTCACACTATTCTCACTAATAATAACCTTACAAATCACACAGTTCTTAACCTCAAAGGGGTTGCGATTGGGAATGGTTGGATAGATGATAATATGTGTGGAAAAGGAATGTATGAGTATTTCTGGACACATGCTTTGAACTCTGATGAAACCCATGAAGGAATTGAAAGGCATTGTGACTTTGAGAGTGGGAACTTAACAAGTGAATGCAACAAATATCAAAGAAGAGGGGATGATGAGATTGGAGTGATTGACATTTATGACATATATGGTTCCCTCTGTGATCCAGCTGCTCAAAGTCCACCTTCTGACAGCAATTTCGACCCTTGTTCTGACGAATATACCAAATCCTACTTAAATCTGGCCCAAGTACAAGAGGCTCTTCATGCTAAAGTCTCAGAATGGTCTCCTTGCAGTGCGGTGGGATGGACAGATAGCCCAGCAACAGTTCTACCAACTATAAATGGGTTAATATCAAGTGGCATAAGAACATGGTTATATAGTGGTGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAGTAAATACCTTGAAACTTCCAGTGGAGACAACATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATACTTGATTGGGTACAAAGGGCTCACCCTCATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTCCCAACCAAAGCGAGCGTTGACCATGATCTCATTTTTTCTTCAGGGAGAACTTCCTCCCGAATTAAACTCTTAG 1461 0.4333 MNPMLSMKVLVWFMFLSWCHFAIPCEANQQGEYLYKLIRSKRGEKVSSEEASMAKNIGDGDFWKVEEERVLMEDDKVKGLPGEPEGVDFDQYGGYVTVDAKAGRRLFYYFVESPHNASNKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGRTLRKNEYAWNNVANVIFLESPAGVGFSYSNTSSDYSNSGDKSTAMDSYTFLINWLHRFPHYKSRDLFITGESYAGHYVPQLAHTILTNNNLTNHTVLNLKGVAIGNGWIDDNMCGKGMYEYFWTHALNSDETHEGIERHCDFESGNLTSECNKYQRRGDDEIGVIDIYDIYGSLCDPAAQSPPSDSNFDPCSDEYTKSYLNLAQVQEALHAKVSEWSPCSAVGWTDSPATVLPTINGLISSGIRTWLYSGDTDGRVPITSSRYSVNTLKLPVETTWRPWYSGNEVGGYLIGYKGLTLITVRGAGHMVPSSQPKRALTMISFFLQGELPPELNS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00228 486 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Phco2g00228 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 465 IPR001563 GO:0004185|GO:0006508
Phco2g00228 486 Gene3D - 384 478 - -
Phco2g00228 486 Gene3D - 344 375 - -
Phco2g00228 486 Gene3D alpha/beta hydrolase 71 330 IPR029058 -
Phco2g00228 486 Pfam Serine carboxypeptidase 81 477 IPR001563 GO:0004185|GO:0006508
Phco2g00228 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Phco2g00228 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Phco2g00228 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Phco2g00228 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Phco2g00228 486 FunFam Carboxypeptidase 71 330 - -
Phco2g00228 486 FunFam Carboxypeptidase 384 478 - -
Phco2g00228 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Phco2g00228 486 SUPERFAMILY alpha/beta-Hydrolases 77 479 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00228 Phco-Chr2 1780941 1785278 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00228 2 1780941 1785278 Phco2g00228 2 1780941 1785278 ECH