Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00227 ATGCAGGGAAGCTCGAGAATTGCAAGTAAAAGTGGAAAAGCCTCAAGCAGAGAAAGAAAATTGGCTTTGAAACAAGATGTGGATAGGTTGAAGAAGAAGCTTAGGCATGAAGAGAACATTCATAGAGCATTGGAGAGGGCTTTCAACAGGCCATTGGGAGCTTTGCCTCGTCTTCCTCCATATCTCCCTCCATATATACTAGCTCTTCTGGCTGAAGTGGCGGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGAAGGTTGTGCATTTCAGACAGGATTTGTACCAGGAAGCTGTCTACATGTCATCTTCTATGAGGAAACTTGAACATTCAGTTTCAGCTCCTCCAAACAAGTCAAATTCAACCACGGATAGTCCCAAGTTGGAAAAATTGAAGTTTCAATCCCAAACAGTTGGTAATTCAGCAGCAGCATCTGCAACTGGGCCTACCACAACTCTCACAGAGGAGAAGGAGAATCAATCCTGTAGTAATTCTTCCAAGAGCAGGAACCAATCATCCAACCATATGAACAAATATGCAATTAAAAGACTTCACAATAAATCGCCCCAGAAAAGGTTGGATCATCCAAAAATAAAGCAAGAACCAAGGTTGAACAACCAGCAAATTGCAGATTTGAGAAACCATAGTCCACATAAAAGTTCATCAGAAGCTGAGAGACCAAATATAATTTCGGAAAATATTGTGAAGTGCTTATCAAGCATTCTCATGAGAATGAGTGATGTGAAGAATTCAGGTTCTGCATGTGACATTCCTCACTTGTGGGATCTAAAACCCAAAATGTGTGATGAAGAAACAGTGTTTGGGGATCCATATGGCATCTGTTTGGAATTTGGGAAGAGGGATATCGGTCCATACAAGCAATTATGTGCAATTGATGCTAAATCTTTCAATCCAAAACGAACTGCAAATACTTTGTTTTTACTACACCGTTTGAAACTTCTTTTTAGGAAACTAGCCTCTGTCAACCTAGAAAACCTCAACCATCAGGAGAAGCTCGCATTCTGGATAAACATCTACAACTCCTGTATGATGAATGCATTCATAGAAAATGGCATACCAGAAAGTCCTGAAATGGCTGTTGCACTGATGCGGAAGGCAACAATAAATGTGGGTGGACACGTGCTAAGTGCAGCAACCATAGAGCATTTCATTCTTAGACTTCCTTATCATTGGAGATTTACGTTTTCCAAGGGAACAAAAAATCATGAAATGACAGCAAGAAGCATGTATGGACTGGAACTGTCAGAACCTCTAGTGACATTTGCTCTCTCTTGTGGAACCTGGTCCTCTCCTGCTGTGAGAGTTTACACTGCATCCCAGGTTGAGAATGAACTGGAAGTGGCCAAAAGAGAGTTCTTACAGGCAGCAATTGGATTTTCAACTTCAAAGTTTTCTGTCCCTAAGTTACTGGATTGGTATTTGCTGAACTTTGCAAAAGACTTGGAATCGTTGCTGGACTGGATCTGCCTCCAGTTACCAAGTGAACTGGGGAAACAAGCCATAAAACTCCTAGAGGAAAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATAATGCCATATGAGTTCAGCTTTAGATACTTGATATGCACATAA 1617 0.41 MQGSSRIASKSGKASSRERKLALKQDVDRLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEKVVHFRQDLYQEAVYMSSSMRKLEHSVSAPPNKSNSTTDSPKLEKLKFQSQTVGNSAAASATGPTTTLTEEKENQSCSNSSKSRNQSSNHMNKYAIKRLHNKSPQKRLDHPKIKQEPRLNNQQIADLRNHSPHKSSSEAERPNIISENIVKCLSSILMRMSDVKNSGSACDIPHLWDLKPKMCDEETVFGDPYGICLEFGKRDIGPYKQLCAIDAKSFNPKRTANTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMAVALMRKATINVGGHVLSAATIEHFILRLPYHWRFTFSKGTKNHEMTARSMYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREFLQAAIGFSTSKFSVPKLLDWYLLNFAKDLESLLDWICLQLPSELGKQAIKLLEERKTEPLSQFVQIMPYEFSFRYLICT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00227 538 Coils Coil 66 93 - -
Phco2g00227 538 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g00227 538 MobiDBLite consensus disorder prediction 109 128 - -
Phco2g00227 538 Pfam Leucine-zipper of ternary complex factor MIP1 16 97 IPR025757 -
Phco2g00227 538 MobiDBLite consensus disorder prediction 134 226 - -
Phco2g00227 538 Pfam Protein of unknown function, DUF547 331 460 IPR006869 -
Phco2g00227 538 PANTHER EXPRESSED PROTEIN 9 536 - -
Phco2g00227 538 MobiDBLite consensus disorder prediction 134 179 - -
Phco2g00227 538 Coils Coil 13 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00227 Phco-Chr2 1762053 1764976 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00227 2 1762053 1764976 Phco2g00227 2 1762053 1764976 ECH
Phco2g00227 2 1762053 1764976 Phco7g00429 7 3046761 3049970 PCT