Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00222 ATGGCCCTTAACGACTTCTTCGCCGGCGAGATTGCGACGGAGCTTCTGAAAATGCTCATCAGCATCTCTCGGAAGTCGCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCACCTACATACACGAGCTCCTCCCCACCATTGAGGAGATAAAGTACTCAGGCGTCGAGCTCCCCGCCCTGCGGCAGTCCCAGCTCCGCCGTCTATCGGAGCTTCTCCGGTCCGGTGTGGAGCTCTCCCAAAAGGTCCTGGCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCACCTCGCCAAGAAGATGGACAAGCTCGAGAAGACCGTCTCAAAATTCCTCCTCGGCCCCATGCAGGCCCACATCCTGGCCGACGTCCACCACACGCGCTTCGAGATGGCCGAGCGCTTCGACCGCGTTGACAACTCCGTCCGTCTCCTCGAACAGTACTTCGGGAACATTAAGATTGGTGTCGGCGGCGGCGGCTGGGTTGAGGAGGCTGTCAGGAGTGTGAATGAGGATGTTGTTGACGGAAACTCCGCTGTGGGGTTGGGGTTCGGGAAGATTAAGGTAAGGGAGATGGTTGTCGGGAGGGAGGATCTCTGGGTTGTCGGGATTTCTGGGATTGGCGGCTCCGGGAAGACCACTCTCGCTAGAGAGGTCTGCAAAGATGAACAAGTTAAATGTTATTTCAGGGAGAGGATTTTGTTCCTGACAGTGTCGCAGTCTCCTAACGTGGAGCAACTAAGGACGAAGATTTGGGGGTATATTATGGGCAACGAGAGATTGGATGCGAACTATGTGGTTCCACAGTTAATGCCGCAGTTTGAGCGCAAAAGCGAAGCAGCTCGAACTCTGATTGTTCTGGATGACGTGTGGACACTCTCTGTGGTGGAGCAGCTTGTGTGTAGAATACCTGGTTGCAAGTTTCTTGTGGTGTCCAGAACTAAATTCCAAACGGTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGGCAGAAATCAATCCCTTTAGCTGCTAATCAGAATTTGGTGAAGCAGGTTGTCACTGAGTGTGGAAGGCTTCCTTTGGCTCTTAAGGTGATTGGAGCTTCTTTGCGAGATCAAACTGAGATGTTTTGGTTAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGTGAATCCCACGAAATCAATCTGATTGAAAGAATGGCAATCAGTATCAATTACCTTCCAGAAAAAGTCAAGGAATGCTTCTTGGATCTGTGTTCATTTCCTGAGGATAAAAAAATCCCTTTGGATGCTCTCATCAATATGTGGGTGGAAATTCATGATATTCCTGAAACAGAAGCTTATGCCATTGTTGTTGAGCTCTCCAACAAAAATCTCATCACCTTAATGAAAGAGCCTCGAGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCAGTTACCCAACATGATATACTGAGAAACCTAGCCCTTAATTTGAGCAACCGTGGTAGCATTAATGATCGCCGGCGATTAGTAATGCCGAAAAGAGAAAATGGAATTCCTAAAGAGTGGTTGAGATACAAGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCATACAGGTGAAATGAAAGAGGTGGACTGGTGTAATCTGGAATTTCCAAAGGCAGAAGTTTTGATCATTAATTTCACATCCACTGAGTACTTCTTACCTCACTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAACATTTCAGTTTTCAAGAACTTGTCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCCCCCCAGAGCTATCAGGCACTGTCTTGGAAAACTTGGGAAAATTATTTGTTGTCCTGTGCAAGATTAACAACAGTTTGGATGAAAAAGAGGTAGACCTAGCCAGAGTCTTCCCAAACCTCTTTGACCTCACTCTTGATCATTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGCGGAATGAACTCACTTCAAAACTTGAGTCTCACCAACTGCCACAATTTGACTCAATTACCTCTTGAACTAGGGAAACTAAAATCTCTAGAGATCCTTCGTTTATATGCTTGCCCTGATTTGAAAACACTTCCTAATAGCATATGCGGCATGATGAGATTGAAGTATATTGACATTTCTCAATGTGTCAACCTGACATGCTTCCCTGAAGAGATTGGTAGACTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGTTCCATGATCAGAAATATACCAAAGTCTGTATTGTCACTGCAGTCTCTGCAACTTGTAATTTGTGATGAAGAGGTATCTGGGATTTGGAAAGAGGTTGAGAAGGCCAAGCCTAATGTGCATATTCAAGTATCAGAACCGTACTTTGACTTGAACTGGCTTAAAGAGTGA 2457 0.4619 MALNDFFAGEIATELLKMLISISRKSLLCRASADQLITYIHELLPTIEEIKYSGVELPALRQSQLRRLSELLRSGVELSQKVLASSRWNVYRNLHLAKKMDKLEKTVSKFLLGPMQAHILADVHHTRFEMAERFDRVDNSVRLLEQYFGNIKIGVGGGGWVEEAVRSVNEDVVDGNSAVGLGFGKIKVREMVVGREDLWVVGISGIGGSGKTTLAREVCKDEQVKCYFRERILFLTVSQSPNVEQLRTKIWGYIMGNERLDANYVVPQLMPQFERKSEAARTLIVLDDVWTLSVVEQLVCRIPGCKFLVVSRTKFQTVLSYEVELLSEEDALSLFCHHAFGQKSIPLAANQNLVKQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIERMAISINYLPEKVKECFLDLCSFPEDKKIPLDALINMWVEIHDIPETEAYAIVVELSNKNLITLMKEPRAGGMYSSCFEISVTQHDILRNLALNLSNRGSINDRRRLVMPKRENGIPKEWLRYKHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLIINFTSTEYFLPHFINRMPNLRALIIINYSATYACLHNISVFKNLSNLRSLWLEKVSPPELSGTVLENLGKLFVVLCKINNSLDEKEVDLARVFPNLFDLTLDHCDDLTQLPSSICGMNSLQNLSLTNCHNLTQLPLELGKLKSLEILRLYACPDLKTLPNSICGMMRLKYIDISQCVNLTCFPEEIGRLVSLEKIDMRECSMIRNIPKSVLSLQSLQLVICDEEVSGIWKEVEKAKPNVHIQVSEPYFDLNWLKE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00222 818 PRINTS Disease resistance protein signature 361 375 - -
Phco2g00222 818 PRINTS Disease resistance protein signature 200 215 - -
Phco2g00222 818 PRINTS Disease resistance protein signature 276 290 - -
Phco2g00222 818 PRINTS Disease resistance protein signature 678 694 - -
Phco2g00222 818 Gene3D - 408 497 IPR036388 -
Phco2g00222 818 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Phco2g00222 818 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 816 IPR039203 GO:0050832
Phco2g00222 818 Gene3D - 325 407 IPR042197 -
Phco2g00222 818 Gene3D Ribonuclease Inhibitor 522 802 IPR032675 -
Phco2g00222 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 426 IPR027417 -
Phco2g00222 818 Gene3D - 184 320 IPR027417 -
Phco2g00222 818 Pfam NB-ARC domain 197 404 IPR002182 GO:0043531
Phco2g00222 818 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Phco2g00222 818 SUPERFAMILY L domain-like 558 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00222 Phco-Chr2 1725558 1728772 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00222 2 1725558 1728772 Phco2g00222 2 1725558 1728772 ECH