Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00221 ATGAAACGGTTCCAAGTGAATCCATCAAATGCTGACTCCTATAATAGCAAGAAAGAAGAAGAAGAAAGAGAGAAGAAGAGGAGCACCACCATGGCTCTAACGGAACTCTTCACCGGAGAGATAGCCTCCGATCTTTGGAAAATGCTTATCACAATTTCCCGAAAGGCCCTGCGCTGCAAATCGAGTGCGGAGCAACTCATCACCTACGTGCGCGAGATTCTTCCCACGATCGAGGAAGTAAAGTACTCCGGGGTGGAGCTTCCGGCGCCGAGGCAGTCGCAGCTGGACCGACTCTCGGAGATTCTGCGCTCCGGCGTGGAGCTTTCGCACCAGGCGCTCTCCTCCAGCCGCTGGAACGTGTACCGGAACTTCCAGCTGGCGAAGAAGATGGAGAAGCTGGAGAAGCATGTGACGAGGTTTCTGCAGATTCCCATGCAGGCGCACATACTCGCTGACGTGCATCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGCGTGGAGGCGTCGAACCGGCGGATGGAGCGGTTTCTCGGCGAGATGAAGATCGGAGTGAACGGGGGTGGGTGGGTGGAGGAGGCTGTGAAGAGCATGCAGGAAGATGAGACGTGGGTGGAAGGGTGTAACGGGAATAACGGTTTCGGGGTTGGGTTGGACTTCGGGAAGAACAAGGTTATGGAGATGCTTTTCTCCAGTAGTGATGCTGATTGGATTGTCGGGATTTGTGGGATTGGTGGCTCCGGGAAAACCACCCTCGCCAGAGAGCTCCTCAGAGATGACCAAGTCCGATGTTATTTCAAGGACAGGATTTTGTTTTTGGCCGTGTCACAGTCTCCGAATGTGGAGCAGCTGAGAGCGAGGATCTGGGCACACATCATGGGCAGCCAAGGCTTAAATGGAGATTACGTGGTTCCACAACGGATGCCACAGTTTGAGTGCAAAGGGGAAGCTCAAGTTCTTGTTGTTCTTGATGATGTGTGGTCGCTCTCCGTGCTAGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCTCGATTCAGATTCCCAACATTTTTTAGTGCCACTTATCACGTGGAATTGCTGGGTGAAGAGGATGCCCTCTCTTTGTTTTGTCACCATGCTTTTGGACAGAAGTCAATTCCTTTGGGCGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCTGAGTGTGGAAAGCTTCCACTGGCACTAAAGGTGATTGGAGCTTCTTTGCGGGACCAGAACGAAATGTTTTGGTTGAGTGTTAAGAGTAATCTGTCTCAGGGTCACAGCATTGGTGAGTCCTATGAAATCAATCTAATTGATAGAATGGCAATTAGTACCGAATACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGCGCTTTTCCTGAGGATAGAAAGATCCCTCTAGAAATTCTGATCAATATGTGGGTTGAAATCCATGACATTCGCGAGGCAGAAGGATATGCCATTGTGGTTGAACTTTCCAACAAGAACCTTCTAACCTTAGTGAAAGAGGCACGTTCCGGGGGCATGTATAGCAGTTCCTTTGAGATTTCTGTGACTCAACATGATACACTGAGAGACCTTGCTCTTATTTTGAGCAAGCGTGGGAGGATTCACGAACACAGAAGGTTAGTTATGGCACAACGAGAAGAAAATGGACTACTCCCCAAAGAATGGTCAAGATACCAGAACCGACCCTTTGAAGCTCAGATTGTTTCAATCAACACAGGTGAAATGACAGAAATGGATTGGTATGAACTGGATTTTCCCAAGGCTGAAGTGTTGATTATCAATTTCACGTCCAGTGATTACTTTTTACCTCCCTTCATCAGTAAGATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTACCTCATATGCCCGCCTTCACAATGTTTCAGTTCTTAGGAATTTGACCAACTTGAGGAGTCTCTGGCTTGAAAAGGTTTCCACCCCTCAGTTGTCAGGCACTGTCTTGCAAAACTTGGGCAAACTATTTATAGTCCTCTGCCAGATTAACAATAATTTGGATGGGAAACAGTTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGCTGATCTAACCTACTTGCCCTCAAGCATTTGTGGAATAAAGTCACTCCGAAACATGAGCCTCACAGACTGCCACAATTTGTCTCAACTACCTGTTGAATTTGGCAAACTAAAATCTCTAGAGATCCTCCGTTTATATGCTTGTCCATATCTAGAAACACTTCCTCCTACCATGTGTGACATGAAGAAATTGAAGTATATTGACATTTCTCAGTGTACTAACCTCACCTGCTTCCCTAAAGAGATTGGTAGATTAGTAAGTTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAGAGTCAGCAGTGTCACTACAATCTCTGCAGCTTGTAATTTGTGATGAGGAGTTGTACGGTACATGGAGAGATGTTGTTGAGATGGCCAAGTCAAATGTCCAGATTCAAGTACCAGAACCACACTTTGATCTGTACTGGCTTCAAGAATGA 2565 0.4713 MKRFQVNPSNADSYNSKKEEEEREKKRSTTMALTELFTGEIASDLWKMLITISRKALRCKSSAEQLITYVREILPTIEEVKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQIPMQAHILADVHHVRFEMAERFDRVEASNRRMERFLGEMKIGVNGGGWVEEAVKSMQEDETWVEGCNGNNGFGVGLDFGKNKVMEMLFSSSDADWIVGICGIGGSGKTTLARELLRDDQVRCYFKDRILFLAVSQSPNVEQLRARIWAHIMGSQGLNGDYVVPQRMPQFECKGEAQVLVVLDDVWSLSVLEQLVWKIPGCKFLVVSRFRFPTFFSATYHVELLGEEDALSLFCHHAFGQKSIPLGANVSLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKSNLSQGHSIGESYEINLIDRMAISTEYLPEKIKECFLDLCAFPEDRKIPLEILINMWVEIHDIREAEGYAIVVELSNKNLLTLVKEARSGGMYSSSFEISVTQHDTLRDLALILSKRGRIHEHRRLVMAQREENGLLPKEWSRYQNRPFEAQIVSINTGEMTEMDWYELDFPKAEVLIINFTSSDYFLPPFISKMPNLRALIIINYSTSYARLHNVSVLRNLTNLRSLWLEKVSTPQLSGTVLQNLGKLFIVLCQINNNLDGKQFPNLSELTLDHCADLTYLPSSICGIKSLRNMSLTDCHNLSQLPVEFGKLKSLEILRLYACPYLETLPPTMCDMKKLKYIDISQCTNLTCFPKEIGRLVSLEKIDMRECPMIRYLPESAVSLQSLQLVICDEELYGTWRDVVEMAKSNVQIQVPEPHFDLYWLQE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00221 854 PRINTS Disease resistance protein signature 400 414 - -
Phco2g00221 854 PRINTS Disease resistance protein signature 238 253 - -
Phco2g00221 854 PRINTS Disease resistance protein signature 761 777 - -
Phco2g00221 854 PRINTS Disease resistance protein signature 313 327 - -
Phco2g00221 854 ProSiteProfiles RPW8 domain profile. 31 179 IPR008808 -
Phco2g00221 854 Pfam NB-ARC domain 222 444 IPR002182 GO:0043531
Phco2g00221 854 Gene3D - 364 443 IPR042197 -
Phco2g00221 854 Gene3D Ribonuclease Inhibitor 563 837 IPR032675 -
Phco2g00221 854 MobiDBLite consensus disorder prediction 1 27 - -
Phco2g00221 854 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 39 163 IPR008808 -
Phco2g00221 854 Gene3D - 445 536 IPR036388 -
Phco2g00221 854 SUPERFAMILY RNI-like 598 816 - -
Phco2g00221 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 465 IPR027417 -
Phco2g00221 854 Gene3D - 209 352 IPR027417 -
Phco2g00221 854 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 32 852 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00221 Phco-Chr2 1720666 1724212 Wgd