Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00214 ATGTTCACTAATTCACACACGGTAATGCAAACTTTATTGTCACCTTTGCCGGAGCCAGACCTCTCCTTGAACATAAGTCCTCCCTCCATTTCAGATATTTCTGAGGTCAAGGAAGTGGGGGGCTTTAGCAAAGCGATTTACAACGACATGTGCTCAACTTCTGATTCCGGGAGCAGTGGAGGAAGTGATTTGAGCCATGAGTTCCACAACCTTGGTCACCATCGTGAGCCCACGTTGAAGTTAGGCTTTGGAACCGTGGATTTGAATCCTCGCCGTCAGGTTCAAGCTGACACGAGAAGCTTCAGTCATCACCACCACCTTCAACCTCACATCTATGGCCGCGATTTCAAACGAACTGCGAGAGTCGTCAATGGAGTCAAAAGAAGCGTCAGGGCTCCCAGGATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCACGCGGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCAGCACAGGTCATGGGCAGACAGATATTGGAGTATTGAATCCAAGGCCAGGGATTAACATAGTTCATCTGCATGCACCCTCACCCAATTTACCAGACCCCATTCAAACTTCCCACAGGACACCGTGGCAATCATCAATAGAGACAAAAACAAACAATAGTAGACAAGATGCAGAGATGGGTTTGACGTATTCTGACCTCAAGGGAAGTGAAAGCATGGTGAATAATAATGGTCACAGTTATGGTGGAGGGTTGGATTCTACCACTTTGTCACGTTCCGAGGGAATGCTTGACCTTGAATTCAGCCTTGGAAGACCCATTTGGCAAAAAGACCACGCAGAATCATCGAGAGAGATAACTCTTTTGAAGTGTTGA 951 0.469 MFTNSHTVMQTLLSPLPEPDLSLNISPPSISDISEVKEVGGFSKAIYNDMCSTSDSGSSGGSDLSHEFHNLGHHREPTLKLGFGTVDLNPRRQVQADTRSFSHHHHLQPHIYGRDFKRTARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGSTGHGQTDIGVLNPRPGINIVHLHAPSPNLPDPIQTSHRTPWQSSIETKTNNSRQDAEMGLTYSDLKGSESMVNNNGHSYGGGLDSTTLSRSEGMLDLEFSLGRPIWQKDHAESSREITLLKC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00214 316 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 304 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phco2g00214 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 186 IPR006447 GO:0003677
Phco2g00214 316 MobiDBLite consensus disorder prediction 223 250 - -
Phco2g00214 316 SUPERFAMILY Homeodomain-like 130 187 IPR009057 -
Phco2g00214 316 Gene3D - 132 189 - -
Phco2g00214 316 FunFam Myb family transcription factor 131 189 - -
Phco2g00214 316 Pfam Myb-like DNA-binding domain 134 185 IPR001005 -
Phco2g00214 316 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00214 Phco-Chr2 1665378 1668607 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco2g00214 Myb_DNA-binding 1.3e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00214 2 1665378 1668607 Phco2g00214 2 1665378 1668607 ECH
Phco2g00214 2 1665378 1668607 Phco7g00415 7 2936112 2940934 PCT