Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00213 ATGCAACGATCAAGGTCACTCACACACACCCAACGCAATGCATACGTGAGGACCAGACGAGGCAACGCAACGCACGCACCCGATCCAAACCCAAACCTTGCCTCATCCATCTTCCAAACTAAACCACCAATGCTAAGAGAGGAAACTGTGGGTTCCAGAAGCGCCAGGCACAGCGCCGCCACCGCCACCGTCTCCAACAAGGTTCTCGTCGCCGTCAGAGCGGAGAAGATAATCTCCAAAACCGCTTTAGCCTGGGCGCTCACTCATGTCGTTCACTCCAGCGACTCCATCACGCTCCTCGCCGTTTACTCTGCTCACAAAACCGGCAGAAGGTTCTGGCATTTTTCGAGACTCGCTGGAGATTGTACCACCGGACCGGCGGGGAAGTTGCCGGAGCAAATTACAGATATCTCGGAGTCTTGTGCGCAGATGGTGCTTCAGTTGCACAATCAAGTTGAGGTAAGGGTAAAGATTAAGGTGGTGACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTAAATCATTGCATGGATGAACTGAACTGTAGCATTGTGGTGATGAATGGGTCACAGGCAAAAATCCTGAGACTTAACTTAGGGGGTTCCGATGAACTCCAAACTCCTTTTTTCTCGGCTACTTCTTCACCAGGCATAGAAATTGCAAAGCTAAAAGGTAAAAAATTGAAGCATTCTACCCCAGTGGGTAGCCCTGAAGAAGCAGGTACTTCCGTTATCAGAAATATAGGAGTAAATTCAGGGTCAAGTTCTGACTCCACGACTTCTCCTTTCCTTGTCTATGAACAAAACCCTCTCTACGAGGGTCAAGGCCCAGGAAAAAACATACACAAAGCAATCAACGAACCAATAGATTTCAATGTTCAGCCATCATTATACTTTGATATTGAAAGAGATCGCCCTCCCCCGCCATGGCCGCGTCCAACACCATCTATGGCTAGTGAAAACAATACTGTATTTTGGATTCCTCAAAACCACATTGTAGACGACAAGTTTCAGAAAAATAAAAACAACAGTATTATCCAAAGAACTAAATCTCCATCTTCGAAAACTTTACTTGAGAATTTTATACGTTGTGATCAAGAGATGAGAAGAAAAGAATATGGGTTTGACCAAGCTCAACCCGACTCAAGCAACAGAGATAATTCCATACCTTTGGGAAGAACTACCTCAATACCTCCTCCCTTATGCTCACAGTGTCATAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGGTTTTCTTACAAAGAAATAGAGGAAGCTACTGATATGTTCTCAGATGTGAACTTTTTGGCTGAAGGTGGATTCGGTGTGGTCCACAAGGGAATACTCAAAGATGGTCAGGTTGTTGCGGTGAAACAATTGAAGTTTGGGGGTTCTCAAGCAGATATTGATTTCTGCAGGGAAGTTCGGGTTTTGAGTTGTGCACAACACAGAAATGTTGTGCCGTTGATAGGATTTTGTACAGAGAGCAATTTGAGGATATTAGTTTATGAGTACATATGCAACGGATCCTTAGACCTCTACTTATATGGAGATGAGAGTATGCCTTTCGATTGGAACTCACGGTTAAAGATAGCAATTGGAACTGCACGAGGCTTGCGCTATCTTCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGACCCAAAAATATCCTTTTAACCCATGACTTTGAACCTTTGGTGGCGGATTTTGGGCTTGCTAGATGGCACTCAGAATGGAATATAAATACAGAAGATCGGGTTATAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGAGACTGGAAACCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTATTAGAGTTAATAACAGGTAGAAGAATTAGCGAGTTGGAACAGTTCAATGGACTCTCGTATCTTTCTGAATGGTTTCACCCTCTACGCATGTCAGAGCCCCGTCATATATTACAAGACGATCGATCTCTCAAACCATGCTTCAACTCTGAGGAGTTATTGGCATTTAATCTTCAATTTCAAGCCATGGCACGAGCTGCTTCGTTGTGTCTCCGTGTGGATCCTAATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTGCTGGAAGGGGCTGATCCAGTTCGTCCTATGGGTTTAGACATGAATTCAGTTGGTAACACAAGTGGGCATTTAAGCGGTTTGAAGTCGCTCACTCCACCAGAAGGTACAACAAGTCATTCTCGTAGACTATCACATTGA 2316 0.446 MQRSRSLTHTQRNAYVRTRRGNATHAPDPNPNLASSIFQTKPPMLREETVGSRSARHSAATATVSNKVLVAVRAEKIISKTALAWALTHVVHSSDSITLLAVYSAHKTGRRFWHFSRLAGDCTTGPAGKLPEQITDISESCAQMVLQLHNQVEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVNHCMDELNCSIVVMNGSQAKILRLNLGGSDELQTPFFSATSSPGIEIAKLKGKKLKHSTPVGSPEEAGTSVIRNIGVNSGSSSDSTTSPFLVYEQNPLYEGQGPGKNIHKAINEPIDFNVQPSLYFDIERDRPPPPWPRPTPSMASENNTVFWIPQNHIVDDKFQKNKNNSIIQRTKSPSSKTLLENFIRCDQEMRRKEYGFDQAQPDSSNRDNSIPLGRTTSIPPPLCSQCHNKAPVFGKPPKRFSYKEIEEATDMFSDVNFLAEGGFGVVHKGILKDGQVVAVKQLKFGGSQADIDFCREVRVLSCAQHRNVVPLIGFCTESNLRILVYEYICNGSLDLYLYGDESMPFDWNSRLKIAIGTARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWHSEWNINTEDRVIGTSGYLAPEYLETGNLTYKVDVYAFGIVLLELITGRRISELEQFNGLSYLSEWFHPLRMSEPRHILQDDRSLKPCFNSEELLAFNLQFQAMARAASLCLRVDPNARPPMSKILRVLEGADPVRPMGLDMNSVGNTSGHLSGLKSLTPPEGTTSHSRRLSH 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00213 771 MobiDBLite consensus disorder prediction 392 411 - -
Phco2g00213 771 MobiDBLite consensus disorder prediction 1 18 - -
Phco2g00213 771 Gene3D HUPs 52 220 IPR014729 -
Phco2g00213 771 ProSitePatterns Tyrosine protein kinases specific active-site signature. 570 582 IPR008266 GO:0004672|GO:0006468
Phco2g00213 771 PANTHER OS01G0750732 PROTEIN 315 732 - -
Phco2g00213 771 Pfam Protein tyrosine and serine/threonine kinase 455 724 IPR001245 GO:0004672|GO:0006468
Phco2g00213 771 Gene3D Transferase(Phosphotransferase) domain 1 525 734 - -
Phco2g00213 771 FunFam Os07g0541700 protein 525 613 - -
Phco2g00213 771 CDD STKc_IRAK 455 729 - -
Phco2g00213 771 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 421 524 - -
Phco2g00213 771 MobiDBLite consensus disorder prediction 738 771 - -
Phco2g00213 771 ProSiteProfiles Protein kinase domain profile. 449 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00213 771 MobiDBLite consensus disorder prediction 1 37 - -
Phco2g00213 771 MobiDBLite consensus disorder prediction 395 411 - -
Phco2g00213 771 Gene3D Phosphorylase Kinase; domain 1 418 524 - -
Phco2g00213 771 SMART tyrkin_6 449 727 IPR020635 GO:0004713|GO:0006468
Phco2g00213 771 SUPERFAMILY Protein kinase-like (PK-like) 429 728 IPR011009 -
Phco2g00213 771 MobiDBLite consensus disorder prediction 740 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00213 Phco-Chr2 1646273 1655624 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco2g00213 PK_Tyr_Ser-Thr 4.3e-41 CL0016