Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00205 ATGGGGAGAGAGCTACCCCAGTCTCCTTGCCTAACCAATATGGAGCCAGACAGAATCAGTTACTTGCCGGGTCATGTAATAGACCAAATTTTGTCGCATTTGTCAATTAAGGAGGCAGTGAGAACAAGTGTTTTATCTAGCAAATGGAGGTACAGATGTGCCACGCTACCGAATCTTGTGTTCGATAACCAATGTGTCTCTGTGGCTGCTCAGGACCATATGATTATCAAGAACAAGCTTTTGAGAACTGTTGATCATGTACTGCTACTTCATTCTGGGTCAATCAACAAGTTCAAACTCTCCCATCGTGATCTCCTTGGTGTGGCTGATATTGATCGTTGGACGCTTCATTTATGCAGAAAGTCTGTTAAAGAGTTTGTGCTGGAAATCTGGAAAGGACAGCGGTATAAGATCCACTCGTGTTTGTTTTGTTGTCAAAGTTTGACTCATTTAGAGTTGTTTAATTGTTGGCTTAAACCTCCATCTACATTTAAAGGCTTCAAGAACTTAAAGAGTCTTGATCTGCAACATGTTACCTTGGCTCAGGATGTTTTCGAAAACTTGATATCCAGCTGCCCAGTGCTTGAACGGTTGACATTGATGAACTTTGATGGTTTCACTCATCTTAATATTGATGCACCGAATCTCCTTTTCTTTGACATTGGGGGTAAATTTGAAGATATTAGCTTTGAGAACACTTTCCAATTAGCTGTGGTATCCATTGGCTTGTATGTGAACTTTGAAATCAATCAAACTAGATTTCGTGGAGGCTCTAGTAATTTGCTCAAATTTTTTGTTCATCTGCCACACGTGCAAAGGCTAGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTGGGGGTTGTGCCAGTAAATCTTCCAAGACCGTGCATTGATCTAAGTTATCTTTCCATACGAATAAACTTTAATGATTTGAAGGAAATCGCAGCTGCTCTTTGCCTCTTAAGAAGCTCCCCAAATCTACAAGAACTAGAAATATTGGCTCGACCGGAGGAGCAGACTGTTCTGGTAACACACACCTATTCTTGGGAAGATGTCTATTTTGCTTGTCCAGAGATGCATCTGCGAAATGTGAAGATAGATGGCATATCTGGAATCAAACCTGAATTAGATTTTATCAGTTTTCTACTTCTATACTCTCCTGTGTTGGAAAGGATGATTGTGAAGCCTGTTTCAAACATCGGAACAGAACTGATGAAAGAACTGTTGCGGTTTAGAAGAGTCTCAAGACAAGCTGAAATTATTTACCTGGACTCCTCCTAG 1284 0.4034 MGRELPQSPCLTNMEPDRISYLPGHVIDQILSHLSIKEAVRTSVLSSKWRYRCATLPNLVFDNQCVSVAAQDHMIIKNKLLRTVDHVLLLHSGSINKFKLSHRDLLGVADIDRWTLHLCRKSVKEFVLEIWKGQRYKIHSCLFCCQSLTHLELFNCWLKPPSTFKGFKNLKSLDLQHVTLAQDVFENLISSCPVLERLTLMNFDGFTHLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSIGLYVNFEINQTRFRGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPVNLPRPCIDLSYLSIRINFNDLKEIAAALCLLRSSPNLQELEILARPEEQTVLVTHTYSWEDVYFACPEMHLRNVKIDGISGIKPELDFISFLLLYSPVLERMIVKPVSNIGTELMKELLRFRRVSRQAEIIYLDSS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00205 427 Gene3D Ribonuclease Inhibitor 77 426 IPR032675 -
Phco2g00205 427 ProSiteProfiles F-box domain profile. 16 64 IPR001810 GO:0005515
Phco2g00205 427 SUPERFAMILY RNI-like 120 333 - -
Phco2g00205 427 SMART 9598neu4hmm 356 424 IPR006566 -
Phco2g00205 427 Pfam F-box domain 20 52 IPR001810 GO:0005515
Phco2g00205 427 SUPERFAMILY F-box domain 15 67 IPR036047 GO:0005515
Phco2g00205 427 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Phco2g00205 427 PANTHER F-BOX PROTEIN-LIKE 17 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00205 Phco-Chr2 1562259 1565090 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00205 2 1562259 1565090 Phco2g00205 2 1562259 1565090 ECH