Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00201 ATGAAGTCCAATCCAAAATCAGAACCACCCCACTTGTTACACTTTCTAATAACCCTCTCCCTATTTTTCTTCTTTTTCTCGTGTGTATCTTCCACAAACACCTTCTTCACCCAACAATTCAAAGAAGCCCCTCAATTCTACAACTCCCCAAAATGCCCCTCTCTTTCCAACACCGAACATTCAAACGTATGCTCCGAAGAAGCTGTACACGTGGCAATGACGCTGGACACGACATACATTCGAGGTTCAATGGCGGCGATCCTCTCCGTCCTCCAACACTCCTCGTGCCCGCAAAACGTCTTCTTCCACTTTGTCTGCTCCTCCAACGCGTCCCTCCTACGCGCCACAATCGCCACCTCATTCCCCTACCTCAATTTCCAAATCTACCCCTTCCATGACGACGTCGTTTCCGGCCTCATCTCCACCTCAATCCGCGCCGCACTTGATTGCCCCCTCAACTACGCGCGCAGCTACTTGCCCAACTTAATCCCACTCTGTGTTAAGCGCGTGGTGTACCTCGACTCCGACCTCGTCCTCGTCGACGACATCGCGAAACTCGCAGCCACGCCGTTGGGAGCAGACAGCGTGTTGGCGGCGCCGGAATACTGCAATGCGAACTTCACCTCCTACTTCACGCCCACGTTTTGGTCGAACCCTTCGCTGTCGCTGACGTTCGCAGAGCGGAGAGTCTGTTACTTCAACACGGGGGTGATGGTGATTGATTTGCAGCGGTGGCGCGTGGGGGAGTACACGAGGAAGATCGAAGAGTGGATGGAGGTACAGAAGAGGATGAGAATCTACGAACTGGGTTCGTTGCCGCCGTTTTTGCTTGTGTTTGCGGGGAACATTGTTCCTGTGGATCATAGGTGGAACCAGCACGGTCTCGGAGGAGACAACTTTCGTGGTCTGTGTCGGGATCTTCACCCTGGTCCTGTTAGTTTGTTGCATTGGAGTGGGAAGGGTAAACCCTGGGTCAGATTGGACGCAAATAGACCTTGTCCTCTCGATGCTCTTTGGGCACCTTATGATCTTTTACGCACCCCATTTTCTCTCGATTCTTGA 1062 0.5264 MKSNPKSEPPHLLHFLITLSLFFFFFSCVSSTNTFFTQQFKEAPQFYNSPKCPSLSNTEHSNVCSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNVFFHFVCSSNASLLRATIATSFPYLNFQIYPFHDDVVSGLISTSIRAALDCPLNYARSYLPNLIPLCVKRVVYLDSDLVLVDDIAKLAATPLGADSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFAERRVCYFNTGVMVIDLQRWRVGEYTRKIEEWMEVQKRMRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLRTPFSLDS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00201 353 Pfam Glycosyl transferase family 8 70 326 IPR002495 GO:0016757
Phco2g00201 353 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 70 333 IPR029044 -
Phco2g00201 353 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 21 346 - -
Phco2g00201 353 FunFam Hexosyltransferase 70 333 - -
Phco2g00201 353 SUPERFAMILY Nucleotide-diphospho-sugar transferases 69 344 IPR029044 -
Phco2g00201 353 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00201 Phco-Chr2 1531066 1532127 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00201 2 1531066 1532127 Phco2g00201 2 1531066 1532127 ECH
Phco2g00201 2 1531066 1532127 Phco7g00403 7 2850122 2851222 PCT