Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00197 ATGGCCCTAAACCCAAACTCAAAAGCCTTTGCACTTATCCACTTCCTCCTCTTCTTATTAGGTAATGTAGCATCTGCCGCAGTGTTCACCCTTCAAAACCGTTGCAGTAACACAGTTTGGCCGGGGACACTTTCCGGCAACGGCGTCGCCACTCTCGGCGACGGCGGTTTCCCTCTGCAGCCAGGTGCGGAGGTTCAGCTCACCGCACCGTCCGGCTGGTCCGGCCGGATCTGGGCCAGGACCGGCTGTAGCTTCGACGGTTCCGGCATCGGAACATGCGTTACCGGAGACTGCGCCGGTGGACTGAGGTGCACCGGAGGAGGCGTTCCACCGGCGACTCTGGCGGAGTTCACTATCGGATTCGCCGGTAACGGTGACAAGGACTTCTACGACGTGAGTCTCGTGGACGGTTACAATGTAGGCATCGGCGTGCTGGCTACCGGAGGAACCGGTGACTGCCAGTACGCGGGGTGCGCGGCGGACTTGAACGCTGCGTGTCCAGAGGAGTTGCAAGTGAAAGACAGCGGCGGCGTAGTGGTGGCGTGCAAGAGCGCGTGCGCCGCATTTAACACGTCGGAGTTTTGCTGCACCGGTGATCACGGGACGCCGCAAACGTGTTCGGCGACGCAATATTCAGAGATTTTCAAGAATGCGTGTCCAACAGCGTACAGTTACGCTTACGATGATGCCTCCAGCACTCGCACCTGTTCTACATCTGATTACGTTATTGCCTTTTGCCCTTAA 744 0.582 MALNPNSKAFALIHFLLFLLGNVASAAVFTLQNRCSNTVWPGTLSGNGVATLGDGGFPLQPGAEVQLTAPSGWSGRIWARTGCSFDGSGIGTCVTGDCAGGLRCTGGGVPPATLAEFTIGFAGNGDKDFYDVSLVDGYNVGIGVLATGGTGDCQYAGCAADLNAACPEELQVKDSGGVVVACKSACAAFNTSEFCCTGDHGTPQTCSATQYSEIFKNACPTAYSYAYDDASSTRTCSTSDYVIAFCP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00197 247 PIRSF PR5 2 247 IPR001938 -
Phco2g00197 247 ProSiteProfiles Thaumatin family profile. 26 247 IPR001938 -
Phco2g00197 247 Pfam Thaumatin family 33 247 IPR001938 -
Phco2g00197 247 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Phco2g00197 247 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Phco2g00197 247 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Phco2g00197 247 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Phco2g00197 247 Gene3D Thaumatin 27 247 IPR037176 -
Phco2g00197 247 CDD TLP-PA 28 246 - -
Phco2g00197 247 PANTHER OS03G0233200 PROTEIN 16 247 IPR001938 -
Phco2g00197 247 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Phco2g00197 247 SUPERFAMILY Osmotin, thaumatin-like protein 27 247 IPR037176 -
Phco2g00197 247 SMART tha2 29 247 IPR001938 -
Phco2g00197 247 FunFam Thaumatin-like protein 1a 27 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00197 Phco-Chr2 1511345 1512949 Tandem