Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00188 ATGACCTCCGACGGAGCTACTTCGGCTGCGGCTGCGGCGGCGAGTCGGAGAAAGCCGTCGTGGAGAGAGAGAGAGAATAACCGAAGGAGAGAACGAAGGCGAAGAGCGATCGCGGCGAAAATATACACTGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGCGCAGAAGCTGGTTGGTGCGTCGAAGAAGATGGAACCACATATCGCAAGGGTTGCAAGCCACCTCTGGCAAATGGTGCAGGGAGCTCGATGAGAAACATTCCCTTTTGTTCTTCACAAAGCCCAAGTCCTTTTTCTTCGTCGTATCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCCTCCCTGTCTCTTCCTCCTCTAAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTTTCATCACCCACGTCGAGAAATCCGAAACCAATTCCTACGTGGGAGTCTATTGCCAAAGAATCCATGGCTTCCTTCAATTACCCTCTCTTTGCAGCTTCTGCTCCTGCCAGCCCCACGCACCGTCACCTTTACACCCCGGCCACTATTCCAGAATGTGATGAGTCTGATACTTCCACCTGTGAGTCTAGCCAGTGGATGAAATTCCAAGCATTTGCTTCTTCTGCATCTGCGTTGCCAACCTCTCCAACCTTCAATCTTGTTAAACCCGTGGTTCCTCTTGGTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGATTGGAGTACAGGTAATGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGATTTGGAACTCACACTTGGAAGTGGGAAGGTGCGGAGTTAA 945 0.4995 MTSDGATSAAAAAASRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNIPFCSSQSPSPFSSSYPSPIPSYQVSPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESSQWMKFQAFASSASALPTSPTFNLVKPVVPLGVPDNSIQEMRTSSEEIGVQVMPWVGEKIHEVALDDLELTLGSGKVRS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00188 314 Pfam BES1/BZR1 plant transcription factor, N-terminal 15 154 IPR008540 -
Phco2g00188 314 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 313 IPR033264 GO:0003700|GO:0006351|GO:0009742
Phco2g00188 314 MobiDBLite consensus disorder prediction 1 32 - -
Phco2g00188 314 MobiDBLite consensus disorder prediction 17 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00188 Phco-Chr2 1457782 1459711 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Phco2g00188 BES1_N 4.5e-62 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00188 2 1457782 1459711 Phco2g00188 2 1457782 1459711 ECH
Phco2g00188 2 1457782 1459711 Phco7g00391 7 2748397 2750037 PCT