Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00179 ATGGAGGTGCTGGAAGAAGCTACCAGAGCCAAGACTAGATCACTTGAGCCCAAATTCATTTTTATCCAACCCAAAAAACTCATTCATGGACCGAAAAGTTGGCCTCACGAGTTTACCCCTCCTCATGGCAACCGGTCGCTTCACGAAACTCAGCGTTCCCCCGCAAGGACGCCGTGGCTGAGCCACGTCGATTCTCGCTCCGTTCAGAACACCGTTTCCTGGCACGGCGGCGACGACGACATGCGTGCCACCGTCAGTTTCTCGAAGCTTTCACTTCTGAAGCGACTATCTCATCGCTTAAATCCAACCCTCTCCTTCGCGTCGGAGACTTGGCCGGCGGCAACGGAGTTCATCGACGATGGATTCCCGTACTACGACATGCCGAAGCGTCGGCGGAGAAACTCGGAGAGGAAGGCGTACGTGACGCCGATGAAGGTTCTGATCGAGAGGGCGAAGGCGGAGAGAGAAGCGCGAAAGGCGCAGCCATGTCGGGTTTTGGAGGAACCACCGGCGAACGGGTTGTTGGTGCCGGAACTGGTAGAGGTAGCCCATCGCGTGTATCAAGCTCGCGGCTCCCTCATCTTCGGACTGAGTCAGCTCGTTCGAGTCATTCCCGTTTTGCGCTGCCGGCTTTGTAATGAGGTCCACATTGGTTATGTTGGTCATGAAATTCGAACATGTACTGGACCAGATAGTTTTTCCAGGAATGCGACACATGTTTGGACAAGGGGAGGTGTTCGAGATGTGGTTTGCTTCCCTAAATGCTTTCATCTTTTTGATCGTGTTGGTAGGCCAAGAGTTGGGCATGATGAAAGGTCCAGCATTCCTCGTATACCTGCCATTGTTGAACTCTGTATACAAGCAGGGCTAGACCTTGAAAAATATCCTACTAAAAGAAGAACAAAGCCTGTATATTGTATTGAAGGAAGAATTGTAGATTTTGAATCAGTTGTGAAAGAGGATGAAACTGAAGGAAAATTTTCTTTTGGGAATGACAAACCATCTATGAATTTATCCACTTTGCTGATCCAACCTACAGAGAAGGTCCTGAATTTATCAGAGAACAATATAAGCCATCTGGATCAGTTAAATGACGAAGAAAGAAAGAAGTTAAGGGATTTAAGTAATCATACACTGAACTCATGGATTGAGATGTCTTCAGGTGCAAAAAAGATCATGGAGAAATATGCTGTGAATACTTGTGGCTACTGTCCTGAGATCCAGGTTGGTCCGAAAGGACATAAGTTGAGAATGTGCAAGGCTTCAAAGCATCAGTCTCGAAATGGTTTACATGCATGGCAAGAGGCAACATTAGATGATCTTGTAGATCCAAATTATGTCTGGCATGTGGAGGATCTGAATGGACCTGCTCTGAATAACAATCTTAAGAGATATTATGGGAAGGCTCCTGCTGTGGTGGAACTCTGTGTGCATGGTGGAGCTCCTGTTCCTGATCAATATAGGAGCATGATGAGATTAGACGTAGTTTCCCCTGATCGAGATGAAGTCGATCTTGTGGCTTAA 1524 0.4738 MEVLEEATRAKTRSLEPKFIFIQPKKLIHGPKSWPHEFTPPHGNRSLHETQRSPARTPWLSHVDSRSVQNTVSWHGGDDDMRATVSFSKLSLLKRLSHRLNPTLSFASETWPAATEFIDDGFPYYDMPKRRRRNSERKAYVTPMKVLIERAKAEREARKAQPCRVLEEPPANGLLVPELVEVAHRVYQARGSLIFGLSQLVRVIPVLRCRLCNEVHIGYVGHEIRTCTGPDSFSRNATHVWTRGGVRDVVCFPKCFHLFDRVGRPRVGHDERSSIPRIPAIVELCIQAGLDLEKYPTKRRTKPVYCIEGRIVDFESVVKEDETEGKFSFGNDKPSMNLSTLLIQPTEKVLNLSENNISHLDQLNDEERKKLRDLSNHTLNSWIEMSSGAKKIMEKYAVNTCGYCPEIQVGPKGHKLRMCKASKHQSRNGLHAWQEATLDDLVDPNYVWHVEDLNGPALNNNLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVSPDRDEVDLVA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00179 507 ProSiteProfiles APO domain profile. 400 485 IPR023342 GO:0003723
Phco2g00179 507 MobiDBLite consensus disorder prediction 32 56 - -
Phco2g00179 507 Pfam APO RNA-binding 124 313 IPR023342 GO:0003723
Phco2g00179 507 Pfam APO RNA-binding 370 489 IPR023342 GO:0003723
Phco2g00179 507 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 207 414 - -
Phco2g00179 507 ProSiteProfiles APO domain profile. 208 294 IPR023342 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00179 Phco-Chr2 1406631 1408781 Dispersed