Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00174 ATGGCTGAACAACGCGCCACCTCTGATACTCGCCAACACCTCTCCGTCGCACCGCCATTGCAGATCTCCAAAGATGTGCAAGGGTCTGACAATCCCATTCCACTCTCACCACAGTGGCTTCTGCCAAAGCCGGGGGAGAATAAACTTGGAACAGGATCTGTGGAGAACCACATGGTCTTAAACCCACCTTTTGGCCATCAATCAGATACTGTTAAGGCATCTGGAAATGGAGAGGATGTGCATGATGTCCATAAGAAAAAGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGTCGTGACCGTTGGCGCGATGAGGAGAGGGACACCAAGTCCTCCATTCGGAAGGATCGTTGGAGAGATGGAGACAAAGACGTAGGTGATTCTCGCAGAGTGGATCGATGGACAGATAATATGTCTGCAAGGAACTTTGCAGAAGCACGGCGTGGTGCATCTGATAATCATAGATGGAATGATTCAGGAAACAGAGAAACTAACTTTGATCAGCGGCGTGAAAGTAAGTGGAACACCCGTTGGGGTCCTGATGACAAGGAGCCGGAGGGCATTCGTGAAAAATGGAGTGACTCTGGGAAAGATGGTGATATACATTTGGAAAAAGGTCTGTCTAACATTTCCAGTCAGGGAAAGGATGAGAAAGAGGGAGATCACTACCGGCCATGGAGATCTAACTACTCACAAAGCCGTGGAAGGGTAGATCCTTCCCATACAACCCCAAGCAAACCAGTCTCTACATTTTCCTATGGGCGTGGTCGTGGGGAGAATACACCCCCAGTCCCTAGTATTGGACATGGCCGGGTTGGTTCTCTCGGTAGCCCTTTGAGTAGCACATACCTTGGAACTGCATTGGAAAAGGTTCAAAGTGGGCATGAAGAACTTAGCCCCCTTAAATATAACAGGACAAAATTGCTTGATGTGTACAGAGTGACTGGTATGGGTACAAATAGAAAACTAGTTGAGGATTTTGTGCATGTACCTAATCTTACTCAGGATGAACCGTTGGAGCCTCTAGCTATACTGGCACCAAATCCTGAGGAACTGTCTGTCTTAAATGGGATTGACAAAGGGGAGATAATTAGCAGCAGTGCACCTCAGGTGCCAAAAGATGGAAAGAGTTCATCAGATTTTACTCATACAAGAAGAATGAAGCCTGGAAGTGCACCTTTCCAGGATAGAGGTGAAGATGGAGGTTCTTACAAAGTGCCTGAAGAGGTTTCCACTAATAAAGATTCGTCCTTTGAAGGAAATACTTCTGTTCATCCTGGTGCTCCATGGCGAACAATGCCAGTTGTTGATCATGCTACCCAGTTTCACGATAGCAGAGATGTAACTAATGATCTTAGATTTAGAAAAACAGATATTAACTCACACCAGCCTAAAGATCCTCATAACCAGTGGGAAAATAATTTGGGTTATTTACCTGACTCCAAAGAAGTAGGTAAGTGGCAAGCTAGTGAAGATCCTGTTATCAAGAGGCAGTTGTCTGGCATATTGGACAGTGAACTTGAAACCAGAAGAGTTCAACAGACTGTTCCAGAGGAGTTATCCCTTTTGTATAAAGATCCTAAGGGTCTAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTACCTGTTCGTCTGGAAAATTCAGCAGCTGACTCACCATGGTTGTCTCTTGGTGATGCCATGCCCCATTTAAGAGCTAAAGCCCGTCCTCCTCCTGGGTTTTCTACACCAAAGCCAAATGACTTCACAGATATTCCTGGCCGACAAACCGGTACATTTGGGAATACTCTTACTGGTATGAATGAGGTTGACATTTTGCGAAGTGATTCTAGGCATCGTCCGAATCCTGATACCGAAGCTGAAAATAGGTTTCTGGAGTCACTTATGTCTGGTAGCAAGAGCAGTCCTCCCCTTGATGGCCTGGCATTGTCAGAAGGTTTACAAGGGTTTGTTGGAAATAATCCTGGTAATATGGGTCCATCAGGAGGTGACAATGGAAATAATCTTTACTTGCTTGCTAAGAGGATGGCACTTGAACGACAACGGTCCTTGCCTACTCCCTACCCATATTGGCCAGGGCGTGATGCAGCTTCATTTCCTCCAAAAGCGGATGTTGTCCCAGATGCCTCCTTGCATTCTAAACTATTGTCTTCAGGGAGTGATAACTCTCGTCAACCTCCTTCCCAAAATTCTGAGTTAATGTCAATCATCCAAGGTTTATCCGATAGGACATCTGCAGGCCTAAATAATGGTGCTGCTGGCTGGCCTAATTATCCCTTACAAGGTGCATTGGATCCGCTACAGAGTAAAGTTGACTTGCTTCATGATCCAAATTTTCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCTGCCAGCACAAAACCAGTTGTCTTTAAGCAATTTATTGTCTCAAGCTGCTGCTGATACCCCAAATAATGCTTTGGCTGCGGAGAAGCTACTTTCTTCGGGTTTATCACAAGATCCGCAGATATTAAATATGTTGCAACAGCAATACTTGTTGCAACTGCATTCTCAAGCGGCTGCTCAAGCACCACAGATCCCTTTGATTGATAAACTGCTATTGCTGAAGCAGCAACAGAAGCAGGAGGAGCAGCAGCAGCTACTAAGACAACAGCAGCAACTGCTTTCTCAAGTGTTGCATGACCAACAGTCTAGCCAGCTTTTCAGTAATTTATCTTATGGACAGTTGCAAGGTGTATTACCGATAGGGAATTTGCGTGTGGATCCTTCTCTAGTTCAACCACAAGAGATCTTTCCCATGAGCTCTCAGGCACCAATCCCCAATGTGCATAATGAGCACAATTCTAATTCTTTGACTCTACCACCTAAAGTTAGTCAAGATACAAGTTTTAATGTAAGCAGTGAAGCTTCTATACGTCTTCCACACCAATTTTTTGGGGATACTCATCATCCAGAAAATTGGGTCCCTAATCTTACTGAACAAATTAATGATCTGTATCTGAAGGAATCGTTCCCAGTATCAACTCATGTTGATGGTTCTCCATTGCTTGATCAGAACACATCCAAAGAGGAATCACTTGTTGTGCCTCTTTCTTCTTCTGATTACTCTGCTAAGTCAGTGGAACAGCTGCTCCCCAGCAATTTTAGGCCTGATGCTGGGGTCCTGGCTTCAACTTCTAAACCTGGTGAAAAATCTGGACATCTGGAGTCTTTTGCATCCAACATTGCCTTATCTACAGTTGGATCTAATGTGTCACCACCAGTGAGTGGTCCTGGTATGGAGGTGAAGGCCAAATTGGATATTGTGTATCAAGAGCAACATGCTGGGAGGGACAGCACTGTATCTGAGCCATCTCTGGGAGACATGAGAAAGGTTGAAGGTCAAGAACCTAAGAAGGCTAGTGAGAAGAAATCTAAGAAGCAAAAATCAACCAAATCTCAGTCTTTTGATCAAACAAAAGGAGTGGTAAAAAATGTGACTTTGCAGCCATCAAAGCAGACAGAAGCTGAAATGCCAAAATTAAGTGATTTTGGGGAAGCTAAGATGGACGAATCATTAAATGATATAAATATGCAGCAAACAAGAGTTAAAGGAACTCGGACTGGAAGTGCTGTCCCAGAGGCTGGTGGCTGGTCTGATATTATTACTGGAAAGATAACTGAAACAGTTGATGCGGGTGAGGTCAACGCAGCTAGTTCTTTTTTGACACAGAAAACTGAGGTATCTGCTGGACGAGCTTGGAAACCTGCTCCTGGTGTGAAACCAAAATCTTTCTTAGAAATTCAACAGGAAGAACAGAGGAAGGCAGAAACAGAAATACTTGTATCGGATGTTGCTGTTTCTGTAAATTCAATGAGCCTGGCAAGTCCCTGGGCTGGGGTTGTGTCCAATCCAGACTCCGTGAAGGTATCTAGTGAAAGTGCCAATGGAGGAGGCAACACTGAGAATCCTGTGAAATCTGAAACTTCAGAAAATGTCAAGAGCAAGAAAAGTCCCCTGCATGATCTATTAGCAGAAGAAGTTCTAAAGAAATCTAATGAAATATATGCTGAGGTTCCAGATAGTATATTTCCCTCACATAATATAGTTGTTCAATCAGAATCATTGGATGACGGCCATTTTATTGAGGCGAAGGATACTAAAAGAAGCCGAAAAAAGTCAACAAAATCGAAGGGTTCAGGAACTAAAGCTTCATTGCCCATTGCATCATCTGATGTACCTATAGCTTCAAGCCCCAGTGAAAAGGGAAAAAGCTCCCGTTGGGCTCAGCAAGAGAAGGAAGAGTTGCCTGTCATCCCTGCAGGACCCTCTTTGGGTGATTTTGTTCTTTGGAAAGGAGAGCGAGAACCGCCAAGCTCGTCTCCTTCTCCAGCTTGGTCTACTGATTCTGGTAAGGTTCCAAAACCAACTTCATTGAGGGACATTCTAAAGGAGCAGGAGAAAAAGGCCTCTTCTGCAATTCCTGTGAGCCCAGTTCCTCCCCCTCAGAAATCTCAGCCTACCCAGTCTACACGAAGTAGTGCATCTTCTTGGTCAGTTTCAGCATCCTCTCCTTCTAAAGCTGCTTCTCCAATTCAGATAAATAACCAAGCTTCTCAATCAAAATACAAGGGGGATGATGACTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATGCTAAGCAGTCTGATTTCCCTCAGCTTGCGAGCCAAGGGACGGGTTCAAAAAACGTACCCTTGAGAGGTAATTCTCCCGGAATATTGACAAGACAGAAATCAGTGAGTGGCAAACCAACTGAACGGTCTCTAGCCTCATCACCTGCCTCTTCTCAATCAATGCAGAAATTGAAAAAAGATGCCATGACAAAGCATTCTGAGGCCACGGACTTCAGAGATTGGTGTGAGAGTGAGTGTGTTAGGCTTATTGGGTCAAAAGATACAAGCTTCCTAGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAGCTGCTCCTTACAGAAAACCTTGGATCATATGATCCTGACCATGAATTCATTGATAAATTCCTGAATTACAAGGAGTTGTTACCATCCGATGTTTTGGACATCGCTTTTCAGAATAGGAATGACAAGAAAGTTGCTCGACATGGTGCGGCCCGGACAGCATCAGCTAATGCAGATATACAGGATGTGGACTACACTGAAGGATCCTCTAAAGGTGGTGGAAAGAAGAAAGGTAAGAAGGGGAAAAAGGTCAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGGATCATGATGGGTGAGATCCAGACTCTAGAAGATTAA 5322 0.4425 MAEQRATSDTRQHLSVAPPLQISKDVQGSDNPIPLSPQWLLPKPGENKLGTGSVENHMVLNPPFGHQSDTVKASGNGEDVHDVHKKKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDVGDSRRVDRWTDNMSARNFAEARRGASDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDIHLEKGLSNISSQGKDEKEGDHYRPWRSNYSQSRGRVDPSHTTPSKPVSTFSYGRGRGENTPPVPSIGHGRVGSLGSPLSSTYLGTALEKVQSGHEELSPLKYNRTKLLDVYRVTGMGTNRKLVEDFVHVPNLTQDEPLEPLAILAPNPEELSVLNGIDKGEIISSSAPQVPKDGKSSSDFTHTRRMKPGSAPFQDRGEDGGSYKVPEEVSTNKDSSFEGNTSVHPGAPWRTMPVVDHATQFHDSRDVTNDLRFRKTDINSHQPKDPHNQWENNLGYLPDSKEVGKWQASEDPVIKRQLSGILDSELETRRVQQTVPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWLSLGDAMPHLRAKARPPPGFSTPKPNDFTDIPGRQTGTFGNTLTGMNEVDILRSDSRHRPNPDTEAENRFLESLMSGSKSSPPLDGLALSEGLQGFVGNNPGNMGPSGGDNGNNLYLLAKRMALERQRSLPTPYPYWPGRDAASFPPKADVVPDASLHSKLLSSGSDNSRQPPSQNSELMSIIQGLSDRTSAGLNNGAAGWPNYPLQGALDPLQSKVDLLHDPNFPQMPFGIQQQRLPAQNQLSLSNLLSQAAADTPNNALAAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAQAPQIPLIDKLLLLKQQQKQEEQQQLLRQQQQLLSQVLHDQQSSQLFSNLSYGQLQGVLPIGNLRVDPSLVQPQEIFPMSSQAPIPNVHNEHNSNSLTLPPKVSQDTSFNVSSEASIRLPHQFFGDTHHPENWVPNLTEQINDLYLKESFPVSTHVDGSPLLDQNTSKEESLVVPLSSSDYSAKSVEQLLPSNFRPDAGVLASTSKPGEKSGHLESFASNIALSTVGSNVSPPVSGPGMEVKAKLDIVYQEQHAGRDSTVSEPSLGDMRKVEGQEPKKASEKKSKKQKSTKSQSFDQTKGVVKNVTLQPSKQTEAEMPKLSDFGEAKMDESLNDINMQQTRVKGTRTGSAVPEAGGWSDIITGKITETVDAGEVNAASSFLTQKTEVSAGRAWKPAPGVKPKSFLEIQQEEQRKAETEILVSDVAVSVNSMSLASPWAGVVSNPDSVKVSSESANGGGNTENPVKSETSENVKSKKSPLHDLLAEEVLKKSNEIYAEVPDSIFPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSGTKASLPIASSDVPIASSPSEKGKSSRWAQQEKEELPVIPAGPSLGDFVLWKGEREPPSSSPSPAWSTDSGKVPKPTSLRDILKEQEKKASSAIPVSPVPPPQKSQPTQSTRSSASSWSVSASSPSKAASPIQINNQASQSKYKGDDDLFWGPMEQSKQDAKQSDFPQLASQGTGSKNVPLRGNSPGILTRQKSVSGKPTERSLASSPASSQSMQKLKKDAMTKHSEATDFRDWCESECVRLIGSKDTSFLEFCLKQSRSEAELLLTENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQNRNDKKVARHGAARTASANADIQDVDYTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTLED 1773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00174 1773 MobiDBLite consensus disorder prediction 75 139 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1132 1156 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1560 1620 - -
Phco2g00174 1773 Pfam GYF domain 527 571 IPR003169 GO:0005515
Phco2g00174 1773 MobiDBLite consensus disorder prediction 214 228 - -
Phco2g00174 1773 SMART gyf_5 523 578 IPR003169 GO:0005515
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1305 1344 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 597 612 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 7 34 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1157 1179 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1402 1428 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1 275 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1116 1179 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 150 207 - -
Phco2g00174 1773 ProSiteProfiles GYF domain profile. 522 573 IPR003169 GO:0005515
Phco2g00174 1773 MobiDBLite consensus disorder prediction 366 434 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 229 259 - -
Phco2g00174 1773 SUPERFAMILY GYF domain 514 579 IPR035445 -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1305 1331 - -
Phco2g00174 1773 Coils Coil 876 900 - -
Phco2g00174 1773 Gene3D - 511 588 IPR035445 -
Phco2g00174 1773 CDD GYF 522 579 IPR003169 GO:0005515
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1729 1750 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 412 426 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1509 1546 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1463 1477 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 1378 1626 - -
Phco2g00174 1773 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1773 - -
Phco2g00174 1773 MobiDBLite consensus disorder prediction 584 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00174 Phco-Chr2 1376399 1384417 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00174 2 1376399 1384417 Phco2g00174 2 1376399 1384417 ECH
Phco2g00174 2 1376399 1384417 Phco7g00380 7 2668047 2679150 PCT