Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00170 ATGTTTCATCACTGGAGCAGTTCACATCAACAGGGCCTGGAAAGCAGCGAGCTTCATGCTGAATCAAAGATGAAGGAGCTGAAGGGTGCAATTGGACCCTTATCAGGGCACAGTTTGAAGTATTGCACTGATGCATGTTTGAAGAGATATTTGGAAGCTCGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGGGGAGACCCTGAAGTGGAGATCAACCTATAAACCAGAGGAAATTCGCTGGCAAGAGGTTGCAATGGAAGGGGAGACTGGGAAATTGTATAGAGCAAGTTTTCGTGATAGACAAGGAAGAAGTGTCCTTATTCTGAGACCAGGAATGCAGAACACTACTTCAATGGAGAATCAGATGCGGCATTTTGTGTATATTTTGGAAAACGCCTTGCTTGATCTTCCACCGGGTCAAGAACAAATGGCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCTTGAAATCAGCCAGAGAGACCATCAACATTTTGCAGAACCATTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAATCCCCCTCGAGTTTTTGAAGCCTTTTGGAAGATAGTTAAGTACTTCTTGGATAGCAAGACATTTCAGAAGGTGAAGTTTGTGTACCCAAAGAACAAAGATAGTGTGGAGCTCATGAAGTCCTATTTTGATGAGGAAAATCTTCCCGAAGAACTAGGTGGAAAAAGCACAATGCGTTATAACCACGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAATGTGCAGCATTTTGGGGATCTGACGAGAAACTCTCAAACCACATTGCTAATGGCCATTCTGCAGCAGTTTTCAATGCAACCTCACCTGACACATGTTAA 882 0.4331 MFHHWSSSHQQGLESSELHAESKMKELKGAIGPLSGHSLKYCTDACLKRYLEARNWNVDKSKKMLGETLKWRSTYKPEEIRWQEVAMEGETGKLYRASFRDRQGRSVLILRPGMQNTTSMENQMRHFVYILENALLDLPPGQEQMAWLIDFTGWSITNNVPLKSARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDSKTFQKVKFVYPKNKDSVELMKSYFDEENLPEELGGKSTMRYNHEEFSRLMVQDDLKCAAFWGSDEKLSNHIANGHSAAVFNATSPDTC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00170 293 Gene3D - 3 273 IPR036865 -
Phco2g00170 293 Pfam CRAL/TRIO domain 100 240 IPR001251 -
Phco2g00170 293 SUPERFAMILY CRAL/TRIO N-terminal domain 20 84 IPR036273 -
Phco2g00170 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 246 IPR001251 -
Phco2g00170 293 SMART CRAL_TRIO_N_2 43 68 IPR011074 -
Phco2g00170 293 FunFam Phosphatidylinositol transfer protein 3 3 275 - -
Phco2g00170 293 CDD SEC14 100 241 IPR001251 -
Phco2g00170 293 PANTHER GH16843P 11 272 - -
Phco2g00170 293 SMART sec14_4 88 243 IPR001251 -
Phco2g00170 293 Pfam CRAL/TRIO, N-terminal domain 41 65 IPR011074 -
Phco2g00170 293 SUPERFAMILY CRAL/TRIO domain 82 256 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00170 Phco-Chr2 1344747 1346399 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00170 2 1344747 1346399 Phco2g00170 2 1344747 1346399 ECH