Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00156 ATGGTGTGGTACAGTGTGAAGCTCCAAAAACCTAAAACCCTAAAACAGTCCCATTTGGTTCTTCAAAATTCAATCAGAGACACCATGAGTTGGAGAACCATAGCTTCCACTTCAAGACACACATTCAAGAGACTCAATGCCATCTTCCGATCTCATTCCACCACCTTCCCTTCTCCGCAGCACTCACGCGCCTCTTCCGCCGCCTTCCTCCACGCGCCGTTCACCACCACCACCCTTCACTCCGCCCAACCCACCAACGCCCTCATCGACCCCAAAGTCCATGCCACGCACAATGACGCCGTCGTCGATGACGAAGACACGACGAACGAGTTTCTATCGCGATTTGTGTGGATAATGAGGAAGAAGGTGCAGGAAGCGTACCCGGAATACGACAAGGCCACCGTGGATGGAATGCTCGTGGCGATCGTGGAGAGGGTTACGTTGGAGATGGAAAAGGGCGGGGGAGTTGAAACGGCGTCGTCGGGTTCCGGGGATTTCAGCGAGGATTTGTGGGGAACGGTGTGGGAGGTGAGCAATTTGGTGTTGGAGGATATGGACAAGGAGAGGAAGAAGGAGAAAATGAAGGGCTTCTTGCAGTGTGAAGAGGTTAAGGAAATGTGCAGATTCGCCGGGGAAGTTGGCATTCGCGGCGATTTGCTTAGGGAGCTTAGGTTCAAGTGGGCACGTGAAAAGATGGAGGAGCGTGAATTCTACGAGGGTTTGGAGAGAATAAGGAAGGAGGCTCAGAATGAGGAGAAGGAAAGAGATGTTGGTGAGGAGGGAAAGAAGGAGAAGGTTGTTGTTGGACTTCCCAAGAGGAAAGGGAAGATAAGGTACAAGATTTATGGGCTTGATCTCTCTGATCCCAAGTGGGCACAAGTGGCTGATAGGATCCATGAGGCAGAGCAGGTGTTTTGGCCGCAGGAGCCGAAGGCAATTACGGGGAAAGCGAAGAATGTTAGGTCGAAGATTCTGTCATCGAAGGAGGATGATGATGGTTTGCAAAGCCTGTTGAATGAGTGGATGGAGCTTGTTCAACCTAGCAGGGTGGAATGGATAGATTTGCTTGACAACCTGAAAGAGCAGAATCGTAGTTTGTACTTGAAGGTGGCTGAAATGTTATTGACTGAAGATTCTTTCCAAACAAATGTCTCTGACTACTCTGGGCTTATTGATATCTATGCTAAAGAGGACTGTTTTGATGATGTTGAGAGATTGGTGAAGAAGATGAGCGAAAATGGTATACGACTAGATGCTTCAACGGCCAGTGTGTTGGTCCACATGTACTGCAAGGGAGGCAATCTTGCCCGTGCAAATGAGGCATTTGAAATCTTGACGGGCCTAGGTTTCCAACCGGACTTCCAAGTCTACAACTCAATGATCATGGCATTTGTGAATAATGGCCAGCCTAAGTTGGCCGAGAAATTGATGAGGGAGATGGATACGGGAAATATTAAACCCATGGAGGAAATGTACATGGCAATGCTCCGATCTTTTTCTCAACTTGGTGATACTAAAGGAGCTGACCGAATTTCATTAGCTATGCAGTTTGCTGGGTTCCAGCAGAGTATGGAGGCATGCACCCTACTTATTGAGGCAAATGCACTCACTGGTGACCCTTATCAGGCAAGACACCATTTTGACTACATGATAAAACTTGGGCATAGGCCTGATGATCGCTGCACTGCTAGCATGATTGCAGCTTATGAGAAGAAAAACTACTTGGACGATGCATTGAATCTTCTTTTGCAGTTAGAGGGGGATGGGTTTGAGCCTGGGGTTGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTAAGTTGCACCTTGTTGATGAAGCTGAGCAGCTTTTAGGAAAAATAGCTTTGCTGGGTGAGGCTCCTCCTTTTAAGCTTCAAGTGAGTCTCTGCGATATGTATGCAAGGGCTGGAAATGAGAAGAAGGCCCTTCAAATTCTAGGTGTTCTGGAATTTAGGAAGGATGAATTAGGACAAGCTGATTTTGAGAGAATTATAAGTGGCCTTATTGATGGTGGGTTTCAGCAGGATGCACAAAGAATATGTGGGATCATGGAGGCACGGGGTTTCGATGCATCAAGGGTTAAGGTTAACCTTTTGAAGCCTGTCTCCAGAGCACGTAGTATGAGATAG 2148 0.4772 MVWYSVKLQKPKTLKQSHLVLQNSIRDTMSWRTIASTSRHTFKRLNAIFRSHSTTFPSPQHSRASSAAFLHAPFTTTTLHSAQPTNALIDPKVHATHNDAVVDDEDTTNEFLSRFVWIMRKKVQEAYPEYDKATVDGMLVAIVERVTLEMEKGGGVETASSGSGDFSEDLWGTVWEVSNLVLEDMDKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEREFYEGLERIRKEAQNEEKERDVGEEGKKEKVVVGLPKRKGKIRYKIYGLDLSDPKWAQVADRIHEAEQVFWPQEPKAITGKAKNVRSKILSSKEDDDGLQSLLNEWMELVQPSRVEWIDLLDNLKEQNRSLYLKVAEMLLTEDSFQTNVSDYSGLIDIYAKEDCFDDVERLVKKMSENGIRLDASTASVLVHMYCKGGNLARANEAFEILTGLGFQPDFQVYNSMIMAFVNNGQPKLAEKLMREMDTGNIKPMEEMYMAMLRSFSQLGDTKGADRISLAMQFAGFQQSMEACTLLIEANALTGDPYQARHHFDYMIKLGHRPDDRCTASMIAAYEKKNYLDDALNLLLQLEGDGFEPGVATYSVLVDWLGKLHLVDEAEQLLGKIALLGEAPPFKLQVSLCDMYARAGNEKKALQILGVLEFRKDELGQADFERIISGLIDGGFQQDAQRICGIMEARGFDASRVKVNLLKPVSRARSMR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00156 715 Gene3D Tetratricopeptide repeat domain 517 713 IPR011990 GO:0005515
Phco2g00156 715 Pfam PPR repeat 387 415 IPR002885 -
Phco2g00156 715 Pfam PPR repeat 456 481 IPR002885 -
Phco2g00156 715 Pfam PPR repeat 596 620 IPR002885 -
Phco2g00156 715 Pfam PPR repeat 564 590 IPR002885 -
Phco2g00156 715 NCBIfam pentatricopeptide repeat 387 419 IPR002885 -
Phco2g00156 715 NCBIfam pentatricopeptide repeat 456 487 IPR002885 -
Phco2g00156 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 418 452 IPR002885 -
Phco2g00156 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 417 IPR002885 -
Phco2g00156 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 453 487 IPR002885 -
Phco2g00156 715 PANTHER OS07G0661900 PROTEIN 118 701 - -
Phco2g00156 715 Gene3D Tetratricopeptide repeat domain 353 516 IPR011990 GO:0005515
Phco2g00156 715 Coils Coil 241 261 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00156 2 1256852 1259268 Phco2g00156 2 1256852 1259268 ECH