Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00149 ATGGAAGTGCAGGAAGGAATTGCCAGAGAGACTGAAGAAGAAGAGAAGGGAAATGGTTTTGGTTTTGATTTTGAATCGAGAATGTTCCGAAATCAGTACGATACCGACGTGACGACATGGAGCCCGGCGGGGCGGCTGTTCCAGGTGGAGTACGCGATGGAGGCGGTGAAGCAGGGCTCGGCGGCGATCGGTCTCCGATCCAAGACGCACGTGGTTCTCGCATGCGTCAACAAGGCCAACTCCGAACTCTCCTCGCACCAGAAGAAGATCTTCAAGGTCGACAACCACATCGGCGTCGCCATCGCCGGCCTCACTGCCGACGGCCGCGTCCTCTCACGCTACATGCGATCCGAGTGCATAAACTATAACTACACCTACGAGTCCCCTCTCCCCGTCGGCAGACTCGTCGTTCAACTCGCCGACAAGGCACAGGTTTGCACGCAGCGGTCATGGAAACGTCCTTATGGGGTTGGTCTCCTGGTAGCTGGATTAGATGAATCAGGAGCTCACCTATATTACAACTGTCCCAGTGGAAACTATTTTGAATATCAGGCTTTTGCTATTGGGTCTCGCTCTCAAGCTGCAAAGACCTATTTGGAACGCAGGTTTGATAACTTCATGGGCTCAACCCGAGAAGATCTGATCAAAGATGCACTTATCGCGACTAGGGAGTCCTTGCAAGGTGAAAAACTGAGGAGTTCTGTCTGCACTATTGCTGTGGTTGGAGTTGGTGAGCCATTCCACATTTTAGATCAGGAAACTGTTCAACAGTTGATTGATAATTTTGAGATTGTGAAGGAAGAAGAACCTCCAGCTGAAGAAGCTGTGCCAGCAACCGAGCAGGATGCTCCCACCGACCAGGCTTCTGGTGCAGATCAAGGTGCTGCTGCTGGAGACCAAGGTGGTTCTCCAATGGAAACTTGA 924 0.5184 MEVQEGIARETEEEEKGNGFGFDFESRMFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDNHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFMGSTREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQQLIDNFEIVKEEEPPAEEAVPATEQDAPTDQASGADQGAAAGDQGGSPMET 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00149 307 ProSitePatterns Proteasome alpha-type subunits signature. 33 55 IPR000426 GO:0006511|GO:0019773
Phco2g00149 307 SMART Proteasome_A_N_2 33 55 IPR000426 GO:0006511|GO:0019773
Phco2g00149 307 MobiDBLite consensus disorder prediction 266 307 - -
Phco2g00149 307 CDD proteasome_alpha_type_1 33 242 IPR035144 GO:0019773
Phco2g00149 307 Pfam Proteasome subunit A N-terminal signature 33 55 IPR000426 GO:0006511|GO:0019773
Phco2g00149 307 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 31 262 IPR029055 -
Phco2g00149 307 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 29 259 IPR029055 -
Phco2g00149 307 FunFam Proteasome subunit alpha type-6 29 259 - -
Phco2g00149 307 ProSiteProfiles Proteasome alpha-type subunit profile. 48 259 IPR023332 -
Phco2g00149 307 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 37 265 - -
Phco2g00149 307 Pfam Proteasome subunit 56 241 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00149 Phco-Chr2 1212455 1216557 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00149 2 1212455 1216557 Phco2g00149 2 1212455 1216557 ECH