Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00144 ATGAAACTTGGTTTCTTTCTGTTCTCTCTAGTTCTCTACCTGATACTAGAACCTGGGATCTTCAAAGTAGAAGCTGATGATCATGATGATGAGTTTGTGAAAGTAAGAGGGGTGCAGCTTGTGTTGAATGAGAGACCCTACTATGCTAATGGTTATAATGCCTATTGGCTGATGTACATGGCCTCTGATCCATCTCAGAGAAACAAGGTCACATCTGCGTTTCAAGTAGCTGCAAACCATGGACTTAGCATAGCAAGAACATGGGCTTTCAGTGATGGTGGAGATAGGCCCCTTCAATACTCTCCTGGATCATACAATGAGGACATGTTCCTGGGACTGGACTTTGTAATATCAGAAGCCAGAAGGTATGGGACCAAGTTGGTGTTGAGTTTGGTGAATAACTATGATAACTTTGGAGGAAAGAAACAATATGTGGAGTGGGCAAAGAGTGAGGGCCAGTCCCTACATTCTGAAGATGATTTCTTCACAAACCCTCTTGTCAAGGGATTCTACAAAAACCATATCAAGAGTGTACTCACAAGGCGTAATAACTTCACGGGAGTGGTTTACAAAGATGATCCAACCATTATGGCTTGGGAACTCATGAATGAAGTTAGATGCCCTTCTGATCATTCAGGGAACACAGTTCAGGCTTGGATTACTGAAATGGCATCTTACTTGAAATCCATAGATGGAAACCATTTACTAGAAGTTGGTCTGGAGGGCTTCTATGGGCTGTCAAAGAAAGAGTCCAATCCAAATTTCCAAGTTGGAACAGATTTCATTGCAAACAACCAAATCCCTGGCATTGATTTTGCAACAGTTCATTCATACCCTGATCAATGGTTACCAGGATCAAGCAATGAAGAACAAACCTTATTTTTGGTTAGTTGGTTGAATGATCACATAAAAGATGCACAGAGCATTCAGAAGCCAGTTCTCTTTGCTGAGTTTGGAGTAGCAACAAAAAACATGAGCAGTGACCCAACTGCAATAAGGGACCAATTTTACAACTTGGTGTATTCTGCTATCTATTCATCAGCAAGTGATGGTGGGGCTGCAACTGGTGGCTTATTTTGGCATCTTCTAGCAGAAGGAATGGATTCTTTTAAAGATGGCTATGAAGTGCCCTTAGATGAGAATAGCTCAACTGCTACTTTGATTGCTCAAGAGTCTCAAAAACTAAACAGAATCAGGATGAAGAAATCCTCCAGAGTTAAGAACAAAGCAAGGAAAGTTAGAAACTGA 1248 0.4119 MKLGFFLFSLVLYLILEPGIFKVEADDHDDEFVKVRGVQLVLNERPYYANGYNAYWLMYMASDPSQRNKVTSAFQVAANHGLSIARTWAFSDGGDRPLQYSPGSYNEDMFLGLDFVISEARRYGTKLVLSLVNNYDNFGGKKQYVEWAKSEGQSLHSEDDFFTNPLVKGFYKNHIKSVLTRRNNFTGVVYKDDPTIMAWELMNEVRCPSDHSGNTVQAWITEMASYLKSIDGNHLLEVGLEGFYGLSKKESNPNFQVGTDFIANNQIPGIDFATVHSYPDQWLPGSSNEEQTLFLVSWLNDHIKDAQSIQKPVLFAEFGVATKNMSSDPTAIRDQFYNLVYSAIYSSASDGGAATGGLFWHLLAEGMDSFKDGYEVPLDENSSTATLIAQESQKLNRIRMKKSSRVKNKARKVRN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00144 415 PANTHER - 8 409 IPR045053 GO:0004553
Phco2g00144 415 FunFam Mannan endo-1,4-beta-mannosidase 6 29 399 - -
Phco2g00144 415 Gene3D Glycosidases 28 399 - -
Phco2g00144 415 Pfam Cellulase (glycosyl hydrolase family 5) 99 326 IPR001547 GO:0004553|GO:0071704
Phco2g00144 415 SUPERFAMILY (Trans)glycosidases 32 387 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00144 Phco-Chr2 1182454 1185620 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00144 2 1182454 1185620 Phco2g00144 2 1182454 1185620 ECH
Phco2g00144 2 1182454 1185620 Phco7g00357 7 2527602 2530656 PCT