Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00143 ATGGAAGCAACCATTGCAACCCCAGGTGCAAGTGGTAATCTAGCTACCAAGGGGTTTGGGACAAGAAGCAGAAGTTCTGGCTTCTGGGGTGAGAACACAAGGGGAAGTCTTAACGTAAGATTTCACAGTACTCAACCATGCAACAGTGTTAAGGCTAGAAGTTCCAAGTCTGGCATTGCATACGCTGTGTACACTCCAGATGTCAACACAGAGCCTCCGTTATTCGATAGATCCATTATTCAGAGTCCAAAAGCAAACCCTGAAAATGTAGCTGCCATCATATTGGGTGGAGGTGCTGGAACTCGACTCTTTCCTCTTACCAGCACAAGAGCCAAGCCTGCTGTTCCCATTGGAGGGTGTTACAGACTGATAGATATTACTATGAGCAATTGCATCAACAGTGGCATCAGGAAAGTGTACGTTTTAACTCAGTTCAACTCTTTCTCTCTCAATGGCCACCTCTCTCGCACGTATAATTCTGGAAATGGAGTGAACTTTGGAGGCGGTTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAATCTGGGAGCAAATGGGCTCAAGGGACAGCTGATGCAGTGAGACGATTTATTTGGGTTTTTGAGGATGCTAAGAACAAGAATATTGAACACATAATGATAATTCCTGGTGACCATCTTTGTCGGATGGACTATATGAAGCTTGTGGAGAAACATAATGCGAACAAGGCTGATATCACAGTTTCATGTGTACCTATGGATGAAAGCGGTGCATTAGACCATGGGATAATGAAAATTGATAGCAAGGGACGGATTATAGAGTTTGTAGAAAATCCAAATGAAACAGATGTGAACACAATGCGTTTTGATACAAGGCTCCTAGGCTTAAGTGCAGAAGAAGCAGAGAAATATCCTTTCATTTCTCCAATGGGTGTTTTTGTGTTCAGAACTGAGGTCCTGCTGAAACTGCTAAGATGGAGCTGTCCTTCTTGCAATGACTTAGGATCTGAACTTATCCCATCTTCTTTGAGGGACCACAAAGTTCAAGCATATATGTTCAACGAGTACTGGAGAGATATGGGAACTATCAAGTCCTTCTTTGAAGCCAATCTGGAACTAACAGAACAGTCTCCAAAATTTGAATTCTATGATCAGAAGACGCCTTTCTTCACTTCCCCAGGATTCCTACCACCCACTAAACTAATAAAATGCAAGCTTGTGGACGCAATTATTTCTCATGGTTGTTTCTTGAGTGAGTGTAAAGTTCAACATTCTATTGTTGGTCAGCGCTCACGTTTAGAGGCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATTCTGAAATTGCAACTCTGCTGGCAGAGGGAAAGGTTCCAGTTGGTGTAGGAGAGAATACCAAAATCAGGAATTGCATAATTGACAAGAATGCCAAGATAGGAAAAAATGTGATTATTGCCAATGCTGATGGTGTTCAAGAAGCAGACAAGCCAGAAGAGGGATTCTACATTAGGTCTGGCATCGTAGTTATAGTGAAGAATGCAACAATTAAAGATGGAACAGTGATTTGA 1572 0.4262 MEATIATPGASGNLATKGFGTRSRSSGFWGENTRGSLNVRFHSTQPCNSVKARSSKSGIAYAVYTPDVNTEPPLFDRSIIQSPKANPENVAAIILGGGAGTRLFPLTSTRAKPAVPIGGCYRLIDITMSNCINSGIRKVYVLTQFNSFSLNGHLSRTYNSGNGVNFGGGFVEVLAATQTPGESGSKWAQGTADAVRRFIWVFEDAKNKNIEHIMIIPGDHLCRMDYMKLVEKHNANKADITVSCVPMDESGALDHGIMKIDSKGRIIEFVENPNETDVNTMRFDTRLLGLSAEEAEKYPFISPMGVFVFRTEVLLKLLRWSCPSCNDLGSELIPSSLRDHKVQAYMFNEYWRDMGTIKSFFEANLELTEQSPKFEFYDQKTPFFTSPGFLPPTKLIKCKLVDAIISHGCFLSECKVQHSIVGQRSRLEAGSELQDTMMMGADYYQTDSEIATLLAEGKVPVGVGENTKIRNCIIDKNAKIGKNVIIANADGVQEADKPEEGFYIRSGIVVIVKNATIKDGTVI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00143 523 Gene3D Hexapeptide repeat proteins 389 523 - -
Phco2g00143 523 SUPERFAMILY Trimeric LpxA-like enzymes 386 523 IPR011004 -
Phco2g00143 523 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 44 523 IPR011831 GO:0005978|GO:0008878
Phco2g00143 523 MobiDBLite consensus disorder prediction 1 27 - -
Phco2g00143 523 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 96 115 IPR005836 GO:0005978|GO:0008878
Phco2g00143 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 484 IPR029044 -
Phco2g00143 523 FunFam Glucose-1-phosphate adenylyltransferase 389 523 - -
Phco2g00143 523 MobiDBLite consensus disorder prediction 9 27 - -
Phco2g00143 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 76 388 IPR029044 -
Phco2g00143 523 NCBIfam glucose-1-phosphate adenylyltransferase 90 487 IPR011831 GO:0005978|GO:0008878
Phco2g00143 523 CDD ADP_Glucose_PP 92 353 - -
Phco2g00143 523 CDD LbH_G1P_AT_C 391 517 - -
Phco2g00143 523 Pfam Nucleotidyl transferase 92 369 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00143 Phco-Chr2 1177733 1181624 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00143 2 1177733 1181624 Phco7g00356 7 2524027 2527345 PCT