Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00135 ATGGCCTCATCCAGTGGAACCTCTAGCATTTCCACAAAGTTCATTCAGAGTTCAGGGTCTGAGGAGGATCTGCAGCTTCTGATGGAACAAAAAAAGAAGAAGAGAAAGCAATCCAACCGTGACTCGGCCAGAAGATCAAGGATGCGAAAGCAGAAGCACATGGATGATCTCACTGCACAACTGCAGCGTCTCCAGAAGGAAAATAACCTAGTCTTCACCCAACTCAACATCACCACCCAATACTATCTCAAGCTTCAGGCTCAAAACTCCATTCTCTTGGCCCAGAAGACTGAACTCACCCAAAGCCTTCACTCATTGAATCACATCATCAATCTCATCAACAAAACAACACCCACAAATGATAATCATCATTACTATAACAATATCAACAATAATTTCATGAATCCCATGCACATGCCCTACCTTAACCAACCAATTGTGGCCACTGCAGACAACATGTTTCTGTGGTGA 471 0.4352 MASSSGTSSISTKFIQSSGSEEDLQLLMEQKKKKRKQSNRDSARRSRMRKQKHMDDLTAQLQRLQKENNLVFTQLNITTQYYLKLQAQNSILLAQKTELTQSLHSLNHIINLINKTTPTNDNHHYYNNINNNFMNPMHMPYLNQPIVATADNMFLW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00135 156 SUPERFAMILY Leucine zipper domain 31 86 IPR046347 GO:0003700|GO:0006355
Phco2g00135 156 Coils Coil 21 41 - -
Phco2g00135 156 Gene3D - 29 82 - -
Phco2g00135 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Phco2g00135 156 Coils Coil 47 74 - -
Phco2g00135 156 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Phco2g00135 156 MobiDBLite consensus disorder prediction 1 24 - -
Phco2g00135 156 MobiDBLite consensus disorder prediction 1 56 - -
Phco2g00135 156 Pfam bZIP transcription factor 29 77 IPR004827 GO:0003700|GO:0006355
Phco2g00135 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Phco2g00135 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 153 - -
Phco2g00135 156 CDD bZIP_plant_GBF1 32 80 IPR045314 GO:0003700|GO:0006355
Phco2g00135 156 FunFam BZIP transcription factor 29 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00135 Phco-Chr2 1123689 1124159 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco2g00135 bZIP_1 2e-08 CL0018