Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00119 ATGGCTGAAGAGGGACAAGTCATTGCTGTGCACACCCTTGAGTCGTGGCAAGAGCAATTCCAGAAGGGAGAGGGCTCCAAAAAGCTGGTTGTGGTGGATTTTACTGCTTCCTGGTGTGGTCCATGCCGTTTTATTGCCCCAATTCTTGCAGAAATTGCCAGGAAGACGCCTGAAGCAATCTTCCTCAAGGTGGATGTGGATGAACTGAGTACTGTTGCTGAGCAATGGTCCATTGAGGCTATGCCAACCTTCTTGTTCTTGAAAGAAGGTAAGCTGGTGGACAAGGTTATGGGTGCTAAGAAGGAAGAGTTGCAAGGGACCATAGACAAGCATTTGTCTCATACTGCTGCTGCTTGA 357 0.4846 MAEEGQVIAVHTLESWQEQFQKGEGSKKLVVVDFTASWCGPCRFIAPILAEIARKTPEAIFLKVDVDELSTVAEQWSIEAMPTFLFLKEGKLVDKVMGAKKEELQGTIDKHLSHTAAA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00119 118 PRINTS Thioredoxin family signature 30 38 - -
Phco2g00119 118 PRINTS Thioredoxin family signature 77 88 - -
Phco2g00119 118 PRINTS Thioredoxin family signature 38 47 - -
Phco2g00119 118 Pfam Thioredoxin 8 109 IPR013766 -
Phco2g00119 118 SUPERFAMILY Thioredoxin-like 4 113 IPR036249 -
Phco2g00119 118 CDD TRX_family 18 109 - -
Phco2g00119 118 FunFam Thioredoxin 6 113 - -
Phco2g00119 118 Gene3D Glutaredoxin 1 118 - -
Phco2g00119 118 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Phco2g00119 118 PANTHER THIOREDOXIN 7 110 - -
Phco2g00119 118 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00119 Phco-Chr2 1049584 1050495 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00119 2 1049584 1050495 Phco2g00119 2 1049584 1050495 ECH
Phco2g00119 2 1049584 1050495 Phco7g00336 7 2386037 2387255 PCT