Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00118 ATGGCATCATTCCCAATGCCACATCTCCTACCATGCACTTCTCTCCCTCACACTAACACTGCCGCTCATCTACTGTTACCCTCCTCTCTCTTCCGCCGTCGCCGGACTCTCCACTCTCTCCGCTGCTCCGCCTCCGACAAGCCGCAAGATGACGCCGTGGAGCTGCCTCTCTTCCCTCTCCCTCTCGTCCTCTTCCCGGGGGCCATCCTCCCTCTGCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACGCTCCTCCACACCGACCTCCGCTTCGGCGTCGTCTACCACGACGCCGTTTCCGGCACCTCCGAAGTGGGCTGCGTGGGGGAGGTGGTCAAGCACGAGCGCCTCGTCGACGACCGCTTCTTCCTGGTCTGCAAAGGGCAGGAGCGGTTCCGAGTGAACGACGTCGTCCGCAGCAAACCCTACCTCGTGGGACGCGTGACGTGGCTGGAGGACCGCCCGTCGGAGAACGACGGCGGAGACGACGCGGAGGCGCTGGCGCGCGAGGTGGAGGGGTACATGAAGGATGTGATAAGGCTCTCGAACCGGTTGGGGGGAAAAGGTGAGAAGGAGATGGGGGATTTGAGACGGAACCTGTTTCCAACGCCGTTCTCGTTCTTCGTTGGAAGCACGTTCGAGGGTGCGCCGAGGGAGCAGCAGGCGCTGTTGGAATTGGAGGACACGGCGAAGAGGTTGAAGAGGGAGAAGGAGACGCTGAAGAACACGCTTAACTACCTCACTGCTGCTTCTGCTGTCAAAGATGCTTTTCCTTCTTCTTGA 789 0.6058 MASFPMPHLLPCTSLPHTNTAAHLLLPSSLFRRRRTLHSLRCSASDKPQDDAVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVVYHDAVSGTSEVGCVGEVVKHERLVDDRFFLVCKGQERFRVNDVVRSKPYLVGRVTWLEDRPSENDGGDDAEALAREVEGYMKDVIRLSNRLGGKGEKEMGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAKRLKREKETLKNTLNYLTAASAVKDAFPSS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00118 262 Pfam ATP-dependent protease La (LON) substrate-binding domain 54 243 IPR003111 -
Phco2g00118 262 Coils Coil 166 186 - -
Phco2g00118 262 SUPERFAMILY PUA domain-like 54 243 IPR015947 -
Phco2g00118 262 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 33 261 - -
Phco2g00118 262 Coils Coil 218 252 - -
Phco2g00118 262 Gene3D - 53 155 IPR046336 -
Phco2g00118 262 Gene3D - 163 260 - -
Phco2g00118 262 SMART lon_5 54 244 IPR003111 -
Phco2g00118 262 ProSiteProfiles Lon N-terminal domain profile. 55 244 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00118 Phco-Chr2 1046919 1047707 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00118 2 1046919 1047707 Phco2g00118 2 1046919 1047707 ECH
Phco2g00118 2 1046919 1047707 Phco7g00335 7 2382517 2383386 PCT