Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00113 ATGGCTGATTTAGGCTCAGCCTCTTCCAGGAGAATGCGGTGTTCCTTTCCTGAAAGAATGCAGCTGCATGTGGCCATGCTGGCCTTGCAGTTTGGCTATGCTGGTTTCCATGTCGTCTCTAGAGCTGCACTTAACATGGGTGTCAGCAAGCTTGTTTTCCCAGTCTATCGTAACATCATTGCCTTGCTTCTACTCCTTCCCTTTGCCTACTTCTTAGAAAAGAAGGAGAGGCCAGCAATGAGTTTAAACTTTGCCTGCCAGTTCTTTCTTCTGGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTATTTGCTTGGGTTGGAGAACACATCCCCTACCTTCGCATCAGCCATACAGAACTCTGTCCCCGCCATTACATTCCTCATGGCAGTCATTTTCAGAGTAGAGCAAGTGAGATTGAACCGAAAAGATGGGTTGGCAAAGGTGGCGGGAACCATTTTGTGTGTAATTGGGGCCACTGTGATCACACTTTACAAAGGTCCAACAATATATAGCCCAGAAACCCGTGTGAACAGCATGAGCAGCAACACAATAACAACTCCAGTGTTTGATTTTGGGTCACTCTCTCTGGGAGATGCAAAGGGGAAGAACTGGACCCTGGGGTGCTTGTACCTGGTAGGACACTGCTTGTCATGGTCTGGTTGGCTTGTGCTGCAAGCACCACTTCTGAAGAAGTACCCGGCTCGCCTCTCTGTCACTTCCTACACCTGTTTCTTCGGACTCTTGCAGTTCCTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATATGCGGGAGTGGTGGCATCAGGAATTGCCTTCGCTGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCAACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGCTGATTGTAGCGGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCTAGAGAACAGCTTGCGATTGCATCCACTACTGATCATAGCATCATAAGGCCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCATCAACAGAGAATGTCTGA 1179 0.4784 MADLGSASSRRMRCSFPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMSLNFACQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAVIFRVEQVRLNRKDGLAKVAGTILCVIGATVITLYKGPTIYSPETRVNSMSSNTITTPVFDFGSLSLGDAKGKNWTLGCLYLVGHCLSWSGWLVLQAPLLKKYPARLSVTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSSTENV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00113 392 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020
Phco2g00113 392 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Phco2g00113 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 350 - -
Phco2g00113 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Phco2g00113 392 PANTHER WAT1-RELATED PROTEIN 24 357 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00113 Phco-Chr2 1013897 1016964 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00113 2 1013897 1016964 Phco2g00113 2 1013897 1016964 ECH