Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00106 ATGAACGCAATTCGTTCTCGTTGGTTTATGAGAATGACAGAAAACATTGGAAAGAGCAACCTCGAATCCCCTGCTGCTGCTTCTGCTTCGACAACGACCTCGCGAGGCTTCTGGCCTTCTGTCTTACGGTGGATACCCACCTCCACCGACCACATCATCAATGCCGAGAAGCGCCTTCTCTCTCTTGTCAAGACTCCATATGTTCAAGAACAGATTAACATAGGTTCTGGTCCACCAGATTCCAGAGTTAGATGGTTCCGTTCATCGAGCAATGAACCACGGTTTATTAACACCGTCACGTTTGACAGTAAGGATGATTCTCCTACGTTGGTAATGGTTCATGGATATGCGGCGTCACAGGGTTTCTTTTTTCGTAATTTTGATGCACTTGCCACTCGTTTCAGAGTTATTGCTATCGATCAACTTGGTTGGGGTGGATCTAGTAGGCCTGACTTTTCATGCAGAAGCACTGAAGAAACCGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACCTGAGCAATTTTATACTACTAGGGCATTCTTTTGGTGGTTATGTTGCTTCTAAATACGCACTTAAGCACCCCGAACATGTAAAACACTTGATTCTGGTGGGACCTGCTGGATTTTCGTCGGAATCAGAGAGAATTACAAAGTTCTTATCTACATGGAAGGGATCAATCCTGAATCAAATATGGGAATCTAATTTTACGCCTCAGAAAATCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATGGTCCGCAAGTATACCAGTGCCAGGTTTGTTACACATACAACAGGGGAAATGCTGACAGAATCTGAATCAAGATTACTGACAGATTATGTTTACCATACTTTAGCAGCCAAAGCTAGTGGCGAGCTGTGCTTAAAATATCTATTTTCATTTGGAGCACTGCCGAGGTCGCCTCTTCTTGAGAGGGCATCAGAGTGGAAGGTGCCCACCACTTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGGGCTCAAGAAGCTCGCAAACATATGAAGGTTCCCTGTGAAATCCTTAGGGTTCCTCAGGCTGGGCACTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCTGTGGTTTACGCTTGCCGAAGGTTTCTAAGTTCTGATCCAGACAGTGAATCCCTTCCTGATTGGCTAACCACAGCATAG 1203 0.448 MNAIRSRWFMRMTENIGKSNLESPAAASASTTTSRGFWPSVLRWIPTSTDHIINAEKRLLSLVKTPYVQEQINIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALATRFRVIAIDQLGWGGSSRPDFSCRSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSSESERITKFLSTWKGSILNQIWESNFTPQKIIRGLGPWGPDMVRKYTSARFVTHTTGEMLTESESRLLTDYVYHTLAAKASGELCLKYLFSFGALPRSPLLERASEWKVPTTFIYGFQDWMNYEGAQEARKHMKVPCEILRVPQAGHFVFIDNPSGFHSAVVYACRRFLSSDPDSESLPDWLTTA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00106 400 PRINTS Epoxide hydrolase signature 357 379 IPR000639 GO:0003824
Phco2g00106 400 PRINTS Epoxide hydrolase signature 133 148 IPR000639 GO:0003824
Phco2g00106 400 PRINTS Epoxide hydrolase signature 182 195 IPR000639 GO:0003824
Phco2g00106 400 PRINTS Epoxide hydrolase signature 196 209 IPR000639 GO:0003824
Phco2g00106 400 PRINTS Epoxide hydrolase signature 324 340 IPR000639 GO:0003824
Phco2g00106 400 Pfam alpha/beta hydrolase fold 108 369 IPR000073 -
Phco2g00106 400 PRINTS Alpha/beta hydrolase fold signature 182 195 IPR000073 -
Phco2g00106 400 PRINTS Alpha/beta hydrolase fold signature 196 209 IPR000073 -
Phco2g00106 400 PRINTS Alpha/beta hydrolase fold signature 133 148 IPR000073 -
Phco2g00106 400 Gene3D alpha/beta hydrolase 94 382 IPR029058 -
Phco2g00106 400 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 94 380 - -
Phco2g00106 400 SUPERFAMILY alpha/beta-Hydrolases 97 376 IPR029058 -
Phco2g00106 400 PANTHER RE40534P-RELATED 33 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00106 Phco-Chr2 943976 947652 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00106 2 943976 947652 Phco2g00106 2 943976 947652 ECH
Phco2g00106 2 943976 947652 Phco7g00315 7 2209073 2216171 PCT