Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00103 ATGAGGTGTAGACTGAATGTTTCTACTGTTGGAATGCTGAAAAACCACATCTCATATCTCACTTCAATCATCATCATTCTTCTTCATTCAGCATTCATGATCGTGAGTCTTCGTCCTTATCTCACCATTACACTACTTATTCTCACTTTACCACAACACTTTCTTCACTCATCCTCACACGTAAACAAAATGAAACAAACTTTTTCAATCCTCTTCACAACTCTCCTCCTCGCCATCAAACTCCCGCCGCCGTCTTCAGTCGTCGCCAGCGGCGCCGGCCAGTGGCAGCTTGTCCACAAAAGCATCGGCATTGTTGCCATGCACATGCAGCTCCTCCACACCGATACTGTCGTAATCTTCGACCGCACCGACTTCGGCCTCTCCAATCTCTCCCTCCCCGGCGGCCGCTGCCGCCACGACCCTAATGAAAAGGTCGTCAAAACAGACTGCACCGCCCACTCCGTCGAATACGACGTCGCCTCCAACACCTTCCGCCCCCTCTTCCTCCAAACCAACATCTGGTGCTCCTCCGCCTCCGTCGACGCCGACGGCACGCTGGTTCAAACCGGCGGCTTCAATGACGGCGACAGAATTGTGCGAACATTCTCGCCGTGCGCCACCTGCGACTGGCAAGAATTCCCCGACGGCCTCGCCGTCCGCCGCTGGTATGCCACCAACCAAAAACTCCCGGACGGGCGCCAAATCATCATCGGCGGCAGAAGACAATTCAACTACGAGTTTTACCCTAAAAGCGACGCCACAGCCAAAAACACCTACTCCTTACCCTTCCTCGTTCAAACGAATGATCCTTCCGAAGAAAACAACCTCTATCCCTTCGTTTTCCTCAACGTGGATGGCACACTCTTCATCTTCGCCAACAACAAAGCCATTCTCTTAGACTACACCAAAAACGCCGTCGTTAAAACGTTCCCCAACATTCCCGGTAACGACCCCAGGTGTTACCCTAGCACCGGTTCCGCTGTTCTCTTGCCCTTACGTAGTAAAAACCCACAGTTCTTTTCTCCAGAAGCTGAGGTTTTAATCTGTGGCGGAGCCCCGAGAGGGGCTTATACACAAGCCAAAAAGGGTACATTTATCGGAGCTTTGCGTACCTGTGCCCGGATTAAAATAACCGACCCGAATCCAACCTGGGTCATGGAGACAATGCCCGGAGGTAAAGGTAGACTCATGAGCGACATGATTATTCTTCCGAACGGCAACGTTTTAATTGTTAACGGTGCGGGTTTAGGGAGCGCTGGCTGGGAGTTCGGGCGCGACCCGGTTCTGGCTCCGTTTGTTTATAACCCGGATAAGGAATCCGGGTCGAGGTTTGAGATTCTTAACGCCACGAATACTCCTCGAATGTATCACTCAAGTGCGGTTTTGGTTCGTGATGGGAGGGTTCTGGTTGCGGGGAGTAACCCTCACGTGGGCTACAATTTCTCGCACGTGATTTTCCCCACCGAGCTCAGCATGGAAGCGTTTTCGCCGCCGTATTTGGAAACGGCGTTTCATAGCATGCGTCCGAGAATCGTTGGTCCGGAGTCCGGGACGAAGGTCGCGTATGGGCAGAAGGTGAAGGTTCGGATCGACATGGCGGGTGGGGCTTTGGTTCGGAGTTTGGTGCGGGTGACGGTGCTGGCGCCGCCTTTCACCACGCATTCGTTTTCGATGAATCAGAGGATGCTGGTTCTGGAACCTAGCCACGTCACAAACGTGGATGGACCAACAACGTTTGAACTTGATCTTACAACACCGGGTTCGCCCATTCTTGCACCACCCGGTTTTTATCTACTGTTTGTGGTCCACCAAGAAATTCCAAGCGAGGGTATTTGGATCCAAATACTTTAA 1851 0.523 MRCRLNVSTVGMLKNHISYLTSIIIILLHSAFMIVSLRPYLTITLLILTLPQHFLHSSSHVNKMKQTFSILFTTLLLAIKLPPPSSVVASGAGQWQLVHKSIGIVAMHMQLLHTDTVVIFDRTDFGLSNLSLPGGRCRHDPNEKVVKTDCTAHSVEYDVASNTFRPLFLQTNIWCSSASVDADGTLVQTGGFNDGDRIVRTFSPCATCDWQEFPDGLAVRRWYATNQKLPDGRQIIIGGRRQFNYEFYPKSDATAKNTYSLPFLVQTNDPSEENNLYPFVFLNVDGTLFIFANNKAILLDYTKNAVVKTFPNIPGNDPRCYPSTGSAVLLPLRSKNPQFFSPEAEVLICGGAPRGAYTQAKKGTFIGALRTCARIKITDPNPTWVMETMPGGKGRLMSDMIILPNGNVLIVNGAGLGSAGWEFGRDPVLAPFVYNPDKESGSRFEILNATNTPRMYHSSAVLVRDGRVLVAGSNPHVGYNFSHVIFPTELSMEAFSPPYLETAFHSMRPRIVGPESGTKVAYGQKVKVRIDMAGGALVRSLVRVTVLAPPFTTHSFSMNQRMLVLEPSHVTNVDGPTTFELDLTTPGSPILAPPGFYLLFVVHQEIPSEGIWIQIL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00103 616 PANTHER SECRETED PROTEIN-RELATED 75 615 - -
Phco2g00103 616 SUPERFAMILY Galactose oxidase, central domain 141 501 IPR011043 -
Phco2g00103 616 Gene3D - 89 505 IPR037293 -
Phco2g00103 616 SUPERFAMILY E set domains 504 615 IPR014756 -
Phco2g00103 616 Pfam Galactose oxidase-like, Early set domain 508 615 IPR015202 -
Phco2g00103 616 Pfam Glyoxal oxidase N-terminus 107 351 IPR009880 -
Phco2g00103 616 CDD E_set_GO_C 504 615 IPR015202 -
Phco2g00103 616 Gene3D Immunoglobulins 507 616 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00103 Phco-Chr2 921227 923077 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00103 2 921227 923077 Phco2g00103 2 921227 923077 ECH
Phco2g00103 2 921227 923077 Phco7g00312 7 2189254 2190900 PCT
Phco7g00311 7 2181519 2183183 Phco2g00103 2 921227 923077 PCT