Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00096 ATGCAATGTCTTGGATACTGTCATATGTTAATGTATATTTTCTCCTTAGACGATGAATTAAATGAAAATTTAGACATATTGTCATTTTTTGTGAAAATGTCGGTCGCTGAAACTGCTTGTTCATACGCATCTCTCATCCTTCACGATGAAGGAATCACCGTCAGTGCAGACAATATCGTCACCTTGTTGAAAACGGCAAAGGTTCAAGTCGATTCTTTTTGGCCTACCTTGTTTGCTAAACTTGCCCAGAAGAAAAATCTTGGCGACTTGATAGCAAATGCTGCAGGCGGTGGGGCACCAGTTGCTGTTGCAGCTGCCCCAGTTGGTGCTGCAGGTGGAGGTGCTGCCGCCGCCGCCGCCCCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCTGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGACTAAGATGGGTTCAGTTTCTCTGAAAATTGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTCTGTCATCACCACCAACCTCTTTGCTCTCTACGCCTTCACTGCTTCCCCTAAACACCCCCATCACCTTCTCCACCATCATGCTCACAAGAATATTTCTCTCATCTCGGAGCAGGTCTCACTCATTCTCAGAGAGATCGATTTGTCCCAGAAGAAACTGGCCCAGATGGAGAAAGAGCTTCTGGGCTACGAAAGCATTGATCTTTCAAGGCCCAACATTGCATCCGAGCTCAAAGTCTTCCTCCAGCGCCAAGAGCTCCCTCTGGGTAAAGATTCAAGAACTGGGATCACTGAGATGGTGTCATCTGTGGGCCACACCTGTGAGAAAAATTCAGACCTGCTGTCTCAGTTCATGAGTTACAAGGTTTTTGGAGCTTGCCCTGATGATTGGAGTGTGGCACAGAAGCTGATCTTAAAAGGGTGTGAGCCTTTGCCTAGGAGGAGGTGTTTTGCAAAGACTGTTTCCAAGGTAGGTTTGTACCCCTTTCCAGATTCTCTTTGGAAGCCTGTTGGTAATAAGACTGTTAACTGGAGTGGTCTTGGTTGTAAGAATTTTGAGTGTTTGAATAGTAAAAGGCTGAGTAGGGAGTGCATTGGTTGCTTTGATTTGGTCCATGGCAATGAGAATGTTAGATTTGTTAAGGGTAAGAGTAAGAACGATTTTCTGGTTGATGATGTGTTGGCCTTGGGAGGTGGAGGGGTTAGAATAGGGCTTGACATTGGTGGGGGGTCTGGATCCTTTGCTGCTAGAATGGCTGATAGGAATGTTACTGTGGTTACTAACACCCTCAATGTTGATGCCCCATTCAGTGAATTCATTGCTGCAAGAGCGCTTTTTCCTCTTTACTTGAGCTTGGATCATAGGTTTCCTTTCTATGACAATGTGTTTGACTTGGTTCATGCTTCAAGTGGCTTGGATGTTGGAGGAAAGAGTGAGAAATTGGAGTTTTTGATGTTTGACATTGACAGAGTTTTGAGAGCAGGTGGTTTGTTCTGGCTGGATAACTTCTTTTGTGCCAATGAAGAGAATAAGCAAGCTTTGACTCGGTTGATTGAAAGGTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGATTGACAGTGTTGGGTCTGGCAAACCTGAAGTCGTGTTATCTGCTGTCCTTCAGAAACCTGTTAGAGTTTAG 1698 0.4476 MQCLGYCHMLMYIFSLDDELNENLDILSFFVKMSVAETACSYASLILHDEGITVSADNIVTLLKTAKVQVDSFWPTLFAKLAQKKNLGDLIANAAGGGAPVAVAAAPVGAAGGGAAAAAAPAAEEKKKEEPEEESDDDMGFGLTKMGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPKHPHHLLHHHAHKNISLISEQVSLILREIDLSQKKLAQMEKELLGYESIDLSRPNIASELKVFLQRQELPLGKDSRTGITEMVSSVGHTCEKNSDLLSQFMSYKVFGACPDDWSVAQKLILKGCEPLPRRRCFAKTVSKVGLYPFPDSLWKPVGNKTVNWSGLGCKNFECLNSKRLSRECIGCFDLVHGNENVRFVKGKSKNDFLVDDVLALGGGGVRIGLDIGGGSGSFAARMADRNVTVVTNTLNVDAPFSEFIAARALFPLYLSLDHRFPFYDNVFDLVHASSGLDVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEENKQALTRLIERFGYKKLKWVVGEKIDSVGSGKPEVVLSAVLQKPVRV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00096 565 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 169 564 - -
Phco2g00096 565 FunFam 60S acidic ribosomal protein P1 33 95 - -
Phco2g00096 565 MobiDBLite consensus disorder prediction 120 141 - -
Phco2g00096 565 Gene3D Vaccinia Virus protein VP39 396 546 IPR029063 -
Phco2g00096 565 Gene3D - 33 94 IPR038716 -
Phco2g00096 565 Coils Coil 215 235 - -
Phco2g00096 565 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 406 533 IPR004159 GO:0008168
Phco2g00096 565 CDD Ribosomal_P1 37 93 - -
Phco2g00096 565 Hamap 50S ribosomal protein L12 [rpl12]. 38 145 IPR027534 GO:0003735|GO:0005840|GO:0006414
Phco2g00096 565 Pfam 60s Acidic ribosomal protein 54 143 - -
Phco2g00096 565 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 414 532 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00096 Phco-Chr2 867529 875984 Dispersed/Wgd