Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00091 ATGGTTAGATCTTGGAGATCGCGGTTAGCATCATTGGCTTATGTTTGCTACTGTGTGAATGAATGCATCAACATCACGAATATAGTAACACGAGTCAATCGGGGACCCAAATGGATGCCAAATTATGAGCAATCTACAATTTGGCCTTGCCCTGTTGCACTGTTTGCTTTTGGTGTTGTGTCCTGTGTGCTTTCTATGGCCACCGACACTACCGACGAGTGCATGTGTGCGTACTTTTCAATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGGCTGTGATGGATAAAGCAGCTGCAGAATTGGACTCTGCTGCGGTTGCTGCCACTCAGAAGCCGAGCTACGTCCAAATCTCAGTAGAGTCATATTCTCATCTGACTGGTTTGGAGGATCAAGTGAAGGCATATGAAGAAAACGTTCAGACGCTGGAGGATGATATCAAGGAATTAAATGAAAAACTGTCTGCGGCTAATTCGGAGATAAATACAAAGGAAAGCCTGGTAAAACAGCATGCTAAAGTAGCAGAAGAGGCAGTCTCAGGCTGGGAAAAGGCTGAAGCAGAGGCTTTAGCTTTGAAGAACCATCTGGAGTCTGTCACTCTTGCAAAACTCACTGCTGAGGATCAGGCTTCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTAAAGGAAGAACATGAACAGAAATTGCAAGAAGTTGCTCTCACTAAAACCAAGCAATTGGACAAGATTAAGGGTGAGCTTGAGGCTAGGATAGTAAGCTTTGAACAGGAACTCCTCAGGTCTGCTTCCGACAATGCAGCTCTGTCAAGGTCCTTGCAAGAGCGCTCTAACATGATAATCAATTTAAGGGAAGAAAAAGCTCACGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATTGAATCATGTGAAAGAGAAATCAATTCACTCAAATATGAGGTTCATGTTATTGCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCCGCAGAAGCTGCTAACAAGCAGCACATGGAGGGTGTTAAAAAAATTGCTAAACTAGAGGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGAAAAAAGTTACCTGGTCCAGCTGCACTTGCGCAAATGAAGCTAGAAGTTGAAAGTCTTGGTCGAGAATATGGAGAAACTCGACTAAGGAAGTCTCCTGTCAAACACCCTAATTCTCACATGTCTCCGATGCCTGGGTTCTCCCTGGATAATGCTCAGAAATTCCACAAAGATAATGAATTTCTTACCGAGCGATTGCTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCTTCAAGGAGTATGTTTGCGAAAACTTTGAGTAGACTTCAAATTTTGGAAGCACAAGTTCAGACAAGTAATCAGCAGAAGGGATCTCCTAAATCCATCATAAATGAAAGCATTTTCAGTCAAAATGCCAGCAATGCACCAAGCTTGATCTCCATGTCCGAAGATGGCAATGATGATGTGGGAAGTTGTGCCGAGTCTTGGTCTACAGCAATTCTCTCTGATCTATCCCAATTCCCTAAAGGAAAGAATACCGAGGAATCGAGCATATCTGATACCACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTCGATTATCAAATGACTGCGGTGAAGTTTCAGGTACTTCAAAAAATATAGCAAATGAAACTGTGACCGATGATGTATCAGAAGTCAGCACTGGGAAATATGTTCCCTCTAACTCCCAAGAGAATAGTGATCCAAATCCATTGCCAAGTGAGGTGTCTTCTGCTGAGGAGTTATCAGCACCTGATCCCCAATCTGATGTTCCTAGCTCGTCACTAGCAGAGCTTCGATCAAGAATATTATCAGTTTTTGAGTCAATGGCTAAAGATGCTGATATGGAGAAGATATTGAAGGATATTAAACACGTTCTTGAAGATGCATGTGACGTTTCAATCCAGGGTTCTGTATCTGACGTTCCCCATTATGTCATGCCTTCTGATGCTACGTGTGATAAGCAGGGTAACACTGAAGATGTTGCCTTAAATGCAGAAAAAGAAATTATTTCATCCCAGCAACCTCCAGAGTATGGGCAGATAACCACGGATCTAGAAGCCGCAATGTCTCAAATTCATGACTTTGTAGTGCTCCTAGCCAAAGAAGCAATGGCAGCGCATGATATATCTTCTGATGGAGATGGAATAAGCCAAAAAATGAAGGAGTTCTCTGACACTTTTAATAAAGTTACCTCCAATGAAGAAAATTTACTACAGTTTGTTCTGGACTTGTCTAGTGTTCTAGCCAAAGCAAGTGAATTCAGATTTAATATTCTTGGTTACAAGGGTACGGAAGCTGAAACTAATAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAATTCTTCAGGAGAGAGATATCAAAATGGTCATTCCCATATTCTTAATCCCTGTTCTGATCCTGAGATTCCCGATGATGGAAATTTGGCCTCAGGCTATGAATCAAATGCCACGACGCAGAAGTTCTCAATGGAGGAGTTCGAAGAGTTGAAGTTAGAGAAAGAGAAGGCAATTGTGGATCTATCAAAATGTGCTGAAAATCTTGAAATGACGAAGTCTCGGTTACTAGAGACAGAGCAACATCTAGCTGAAGTTAAATCACAGATGGCTTCTGCTCAAAGATCAAATAGCCTGGCTGAGACACAGCTAAAATGTATGACTGAATCGTACAGATCAATTGAAACACGTGCAAAGGAGTTTGAGACTGAGCTTAATCATCTACGAAAGAAGACAGAAACTCTAGAGAATGAACTGGAAGATGAAAAGAGGGCTCATGAAGCAGCTTTGGCCAAATACAAGGAGCTAGAAGAACAACTACAAAGGAGTGAGAGCTCAGCTGCTGATGATGAGATTAAGGCTAAGCAGGAGAGAGACTTGACAGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATTTCTTCTTGGCAAGCAGTTTAAAGCTCTGCATCCTCAAACAGAGCCAATGGGATCTCCTTATTCAAAGGCTGAAGGCTTCACGGAGCGTGAACCTAATAGCCCAAGTTTGCAAGATCAAGCAGAGATGGACAGTGCTACTTCTGCATTTGTGCAACGATTGGGTGGAGATTCCCCTTTACATTTTACCAACAGTTTATATAGTCCATCAGATAACGAGTCAATCTTTCCAGCCATATCTTCTGTACAGAATCCAAACCACAGGCCTACTAAGTCATCCTCATCGTCAGCTTCTTCCACTCCAACTCCAGACAAACACACCCGAGGTTTTAGTAGGTTCTTTTCTTCAAAAGGGAAACACGGTCATTGA 3441 0.4246 MVRSWRSRLASLAYVCYCVNECINITNIVTRVNRGPKWMPNYEQSTIWPCPVALFAFGVVSCVLSMATDTTDECMCAYFSMDRRWPWKKKSSDKAVMDKAAAELDSAAVAATQKPSYVQISVESYSHLTGLEDQVKAYEENVQTLEDDIKELNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKLQEVALTKTKQLDKIKGELEARIVSFEQELLRSASDNAALSRSLQERSNMIINLREEKAHAEAEIELLKGNIESCEREINSLKYEVHVIAKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRLRKSPVKHPNSHMSPMPGFSLDNAQKFHKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMFAKTLSRLQILEAQVQTSNQQKGSPKSIINESIFSQNASNAPSLISMSEDGNDDVGSCAESWSTAILSDLSQFPKGKNTEESSISDTTKKLELMDDFLEVEKLARLSNDCGEVSGTSKNIANETVTDDVSEVSTGKYVPSNSQENSDPNPLPSEVSSAEELSAPDPQSDVPSSSLAELRSRILSVFESMAKDADMEKILKDIKHVLEDACDVSIQGSVSDVPHYVMPSDATCDKQGNTEDVALNAEKEIISSQQPPEYGQITTDLEAAMSQIHDFVVLLAKEAMAAHDISSDGDGISQKMKEFSDTFNKVTSNEENLLQFVLDLSSVLAKASEFRFNILGYKGTEAETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEIPDDGNLASGYESNATTQKFSMEEFEELKLEKEKAIVDLSKCAENLEMTKSRLLETEQHLAEVKSQMASAQRSNSLAETQLKCMTESYRSIETRAKEFETELNHLRKKTETLENELEDEKRAHEAALAKYKELEEQLQRSESSAADDEIKAKQERDLTAAAEKLAECQETIFLLGKQFKALHPQTEPMGSPYSKAEGFTEREPNSPSLQDQAEMDSATSAFVQRLGGDSPLHFTNSLYSPSDNESIFPAISSVQNPNHRPTKSSSSSASSTPTPDKHTRGFSRFFSSKGKHGH 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00091 1146 Coils Coil 326 363 - -
Phco2g00091 1146 Coils Coil 899 1023 - -
Phco2g00091 1146 MobiDBLite consensus disorder prediction 1053 1068 - -
Phco2g00091 1146 Coils Coil 280 321 - -
Phco2g00091 1146 MobiDBLite consensus disorder prediction 1097 1146 - -
Phco2g00091 1146 MobiDBLite consensus disorder prediction 575 638 - -
Phco2g00091 1146 Pfam Filament-like plant protein, long coiled-coil 166 1041 IPR008587 -
Phco2g00091 1146 MobiDBLite consensus disorder prediction 1097 1130 - -
Phco2g00091 1146 Coils Coil 423 450 - -
Phco2g00091 1146 Coils Coil 212 246 - -
Phco2g00091 1146 SUPERFAMILY Tropomyosin 877 1036 - -
Phco2g00091 1146 Coils Coil 128 169 - -
Phco2g00091 1146 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 81 1141 - -
Phco2g00091 1146 MobiDBLite consensus disorder prediction 1036 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00091 Phco-Chr2 804067 808959 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00091 2 804067 808959 Phco2g00091 2 804067 808959 ECH
Phco2g00091 2 804067 808959 Phco7g00300 7 2107279 2113009 PCT