Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g00084 | ATGGCCAATAATCCGTCACAGCTTCTACCATCAGAGTTGATTGACAGGTGTATAGGTTCAAAAATATGGGTAATAATGAAAGGTGACAAGGAGCTTGTCGGCACTCTCAGAGGTTTTGACGTTTATGTCAACATGGTTCTTGAAGATGTTACTGAATATGAGATCACTGCTGAAGGGAGACGTATAACCAAGCTAGATCAGATTTTACTCAATGGAAACAACATTGCCATTTTGGTCCCCGGTGGTTCACCTGAGACAGAATGA | 264 | 0.4167 | MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPETE | 87 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g00084 | 87 | CDD | LSm5 | 7 | 82 | IPR033871 | - | |
| Phco2g00084 | 87 | SMART | Sm3 | 12 | 80 | IPR001163 | - | |
| Phco2g00084 | 87 | Gene3D | - | 9 | 85 | - | - | |
| Phco2g00084 | 87 | FunFam | U6 snRNA-associated Sm-like protein LSm5 | 9 | 84 | - | - | |
| Phco2g00084 | 87 | PANTHER | U6 SNRNA-ASSOCIATED PROTEIN | 1 | 85 | IPR033871 | - | |
| Phco2g00084 | 87 | Pfam | LSM domain | 13 | 80 | IPR001163 | - | |
| Phco2g00084 | 87 | SUPERFAMILY | Sm-like ribonucleoproteins | 8 | 81 | IPR010920 | - | |
| Phco2g00084 | 87 | ProSiteProfiles | Sm domain profile. | 9 | 84 | IPR047575 | GO:0003723 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g00084 | Phco-Chr2 | 758114 | 758911 | Dispersed |