Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00081 ATGATCGTTTCTTCGTTGCTTCACCGCACTGTACTAGAATCAACCTTTTGCTTCACAAAACTCTCTTTCATGGCTCTCTTAACTTCCTTGCCTGAACACTCCACCACCCCCAAACGCCACAAACGAAAACCACAGCAGCAGCAGCAACACCAGAAGCAGAAACAGAAGCCACCCTCTTCATGGGATCAAATCAAGAACCTCTTAACCTGCAAACAGATGGAAGGGTCGAGGGTTCACGACCCTTCAAAAGGGTACTCGAGGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTAGTGCATAGGTCTGATAACTCTTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTGGTTTACTCTCCAGGAAACCGGTAACCGCTTCTACACGCTCCACAGCCGCAAAATCAAACTCTGGAACAACCTACACGTCATCGTCTTCCAGGGGGATGCAATTCAGAAAGCTTTCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCTGTTGCAAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTGGAACCGGAGGATTCGGGTAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCGATATGCAAGATCGAACGGATACTGAAAGTGCACAATACCCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTAAAGAACCGTGCGCTGAGCAGCACCAAGAAAAACCCAAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGTGCACGTGGGTCATCCTCGCTGTGCGCCTCCGTACCCGGCTGTGGTGTCTGTACAATAATCAGGCACGGTTTCCAAGGTGGCGGCGGAGGGGACAACACGAAGGTCAAGGGCGTGGGAACCACCGCCAGTAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGACGGCACGCGGAGGGCCATGCTGGTGTGCAGGGTGATCGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAGCACGTGTCGGTTGCGTCCTATGATTCCGTAGCCGGGTACTCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTGGTAATTTATAAAGTGCCTTCGTGTTAG 1287 0.5268 MIVSSLLHRTVLESTFCFTKLSFMALLTSLPEHSTTPKRHKRKPQQQQQHQKQKQKPPSSWDQIKNLLTCKQMEGSRVHDPSKGYSRIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLSRKPVTASTRSTAAKSNSGTTYTSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCACSHCGEVFPKMESLELHQAVRHAVSELEPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALSSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGGGGDNTKVKGVGTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTPPSEEEHVSVASYDSVAGYSGIYSNLEELVVFNPKAILPCFVVIYKVPSC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00081 428 MobiDBLite consensus disorder prediction 109 156 - -
Phco2g00081 428 Gene3D - 210 425 - -
Phco2g00081 428 SUPERFAMILY ADP-ribosylation 212 424 - -
Phco2g00081 428 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 59 423 - -
Phco2g00081 428 ProSiteProfiles Zinc finger C2H2 type domain profile. 187 215 IPR013087 -
Phco2g00081 428 MobiDBLite consensus disorder prediction 32 62 - -
Phco2g00081 428 FunFam C2H2-like zinc finger protein 211 424 - -
Phco2g00081 428 ProSitePatterns Zinc finger C2H2 type domain signature. 187 210 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00081 Phco-Chr2 732112 736455 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g00081 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00081 2 732112 736455 Phco2g00081 2 732112 736455 ECH