Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00071 ATGATCATATGGAAAGCCACAATAATCTACACCTGCGATTCAATTCAACGTCTCATACTAACTCCAGCGTGGTGGTGGGTTCTAACCTGTAACTGTAGACGAGCGATCTCGCTCAATTGGAAGAGAATGATTGCAGAGAGATTCGAGGACGAAGAAAAATGGCTCGCGGAGGGTATCGCCGGGATTCAGCACAACGCATTCTTCATGCATCGCGCGCTGGACGAAGACAATCTCAGAGACGCTCTCAAATACTCTGCGCAGATGCTATCGGAGCTTCGAACTTCCAGGCTCTCACCACACAAATACTATGAACTGTATATGAGAGCTTTCGATGAGCTTCGGAGGCTGGAGATTTTCTTCAAAGACGAAAGAAGACATGGCGTTCCAATTGCTGATCTTTACGAGCTTGTTCAGCACGCTGGAAATATTTTGCCTAGACTGTATCTGCTTTGCACGGTAGGATCTGTTTACCTTAGATGCAAGGATGCTCCAGTAAGGGATGTTCTTAAAGATCTAGTGGAAATGTGTCGCGGTGTTCAGCATCCAATTCGCGGTCTGTTTTTGAGGAGCTACCTTTCTCAAGTCAGTAAAGATAAGCTGCCTGATATTGGCTATGAACACGAAGAGGGGGATTCTAATGATGTGATGGTTGCTGTTGAATTCGTTCTACAGAATTTCACAGAAATGAATAAGCTTTGGGTTCGGTTACAGTTGCAGCATCAGGGACCCGTTCGGATAAGAGAGAAGAGGGAAAAGGAAAGGAACGAGCTCCGTGATCTTGTAGGGAAGAATCTGCACGTTCTGAGTCAGATAGAGGGGGTGAACCTTGAGATGTACAAAGACATCGTCCTTCCAAGTGTCTTAGAGCAGGTGGTCAACTGTAACGATGAGCTTGCCCAATTTTATCTTATGGAGTGTATAATCCAGGTTTTTCCAGATGAGTATCATTTGCAGACACTTGAGACGCTGTTAGGCGCTTGCCCCCAATTGCAGCCCTCAGTAGACATCAAAACAGTGTTATCTCAGTTGATGGACAGGTTGTCAAATTATGCTGCCTCTAGTACTGAAGTATTGCCTGAATTTCTGCAAGTTGAAGCATTTGCCAAATTAAGCACAGCAATTAGCAGGGTGATAGAAGCACAAGTTGACATGCCTATTGTGGGAGCAATTGCTTTGCATGTTTCTCTTCTTACATTTACTCTCCGTGTTCATCCAGATCGATTTGATTATGTGGACCAAGTACTGGGATCATGTGTCAAGAAGCTTTCTGGAAAACCAAAGCTTGATGACAGTAGAGCAACAAAGCAAGTTGTTGCACTTTTAAGTGCTCCACTTGATAAATACAATGATATTGTTACTGCACTGACACTTTCTAATTATCCCCGTGTAATGGATCATCTTGATCATGAAACAAATAAAGTCATGGCCATGGTTATTATCCAAAGTATTATGAAGAATAACACTTGCATCTCTACTGCTGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTTATAATGGATTTGGATGGAACAATTGTGGACGAGGTTGATGAAGAGGATTTCAACGAGGAGCAAAATTCTGTTGCTCGTCTCATACACATGCTTCATAACGATGAACCAGAGGAAATGTTTAAGATAATATGTACCGTAAAGAAGCATATTATGAGTGGAGGACCAAGGCGCTTACCTTTTACAGTTCCTTCCTTGATATTTTCTGCACTCAGGTTGATCAGGCAGTTGCACGGGCAGGATGGAGATATAGTGGGAGAAGAAGTTCCTACAACACCAAAAAAAATATTTCAGCTTTTAAATGAGATAATTGAAGCTCTCTCTTCTCTGTCATTTCCTGAACTGGCGTTAAGACTGTATCTGCAATGTGCTGAGGCTGCTAATAACTGTGACCTTGAACCTGTTGCTTATGAATTTTTCACTCAGGCATTTGTATTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAAGTAACTGCAATTCATTTAATTATCGGGTCTCTTCAGAGAATGAACGTCTTTGGTGTTGAGAACAGGGATACATTAACACACAAGGCAACAGGGTATTCAGCGAAGCTTTTGAAGAAACCTGATCAGTGCCGGGCGGTTTATGCATGTTCTCATCTCTTTTGGGTTGATGATCAAGATGGTATTAAAGATGGAGAAAGGGTATTGCTTTGCCTTAAGCGTGCTTTGAGGATTGCAAATGCTGCTCAACAAATGGCCAGTGTAGCAAGGGGTAGCAGTGGTCCAGTAACACTATTTGTTGAAATACTGAACAAGTACATATATTATTTTGAGAAAGGAAACCCGCAGATCACTAGTGCTACTATCCAGGGGCTTATAGAATTGATCATGACTGAGATGCAGAGTGACTCTGCATCAGCTCTTCCAGCCTCAGATACTTTTTTTACCAGCACATTGAGGTACATCCAATTCCAAAAAGAGAAGGGTGGTATACTTGGTGAAAAATATGACCCTATCAAGGTCTAA 2508 0.4207 MIIWKATIIYTCDSIQRLILTPAWWWVLTCNCRRAISLNWKRMIAERFEDEEKWLAEGIAGIQHNAFFMHRALDEDNLRDALKYSAQMLSELRTSRLSPHKYYELYMRAFDELRRLEIFFKDERRHGVPIADLYELVQHAGNILPRLYLLCTVGSVYLRCKDAPVRDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSKDKLPDIGYEHEEGDSNDVMVAVEFVLQNFTEMNKLWVRLQLQHQGPVRIREKREKERNELRDLVGKNLHVLSQIEGVNLEMYKDIVLPSVLEQVVNCNDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPSVDIKTVLSQLMDRLSNYAASSTEVLPEFLQVEAFAKLSTAISRVIEAQVDMPIVGAIALHVSLLTFTLRVHPDRFDYVDQVLGSCVKKLSGKPKLDDSRATKQVVALLSAPLDKYNDIVTALTLSNYPRVMDHLDHETNKVMAMVIIQSIMKNNTCISTADKVEVLFELIKGLIMDLDGTIVDEVDEEDFNEEQNSVARLIHMLHNDEPEEMFKIICTVKKHIMSGGPRRLPFTVPSLIFSALRLIRQLHGQDGDIVGEEVPTTPKKIFQLLNEIIEALSSLSFPELALRLYLQCAEAANNCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGSLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMASVARGSSGPVTLFVEILNKYIYYFEKGNPQITSATIQGLIELIMTEMQSDSASALPASDTFFTSTLRYIQFQKEKGGILGEKYDPIKV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00071 835 PIRSF Retromer_Vps35 45 835 IPR005378 GO:0015031|GO:0030906|GO:0042147
Phco2g00071 835 FunFam Vacuolar protein sorting-associated protein 35 511 820 - -
Phco2g00071 835 Pfam Vacuolar protein sorting-associated protein 35 54 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Phco2g00071 835 Gene3D - 511 820 IPR042491 -
Phco2g00071 835 PANTHER VACUOLAR SORTING PROTEIN 35 49 834 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00071 Phco-Chr2 680640 689496 Dispersed