Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00065 ATGGGAATTTTGAGCACTATAACAAGTTCTTTAGGATTTGGAGTGGGAACTTCCATTGGGCTAGTGATTGGCTACTATTTGTTCATATACTTCCAGCCAACTGATGTTGAGGATCCAATAATTCAACCCTTGGTTGAGCTAGATCCCAAAACTCTACAGCAGCTGCTTCCAGAGATACCCTCTTGGATTAAAAATCCAGATTATGACCGTCTTGACTGGCTCAATAAATTCATTGAGTATATGTGGCCTTATCTGGACAAGGCAATTTGCAAGACTGCAAGGAGTATAGCAAAGCCCATTATTGCTGAGCAAATTCCAAAGTACAAAATTGATTCAGTTGAATTTGAAGAACTTAGCTTGGGTTGTCTGCCACCAACTTTTCAAGGAATGAAAGTCTACACTACTGACGAAAAGGAGTTGATTATGGAACCATCAGTGAAGTGGGCTGGGAATCCTAATATTACTGTTGCAGTTAAAGCATATGGGCTTCGAGCCACAGTCCAGGTTGTTGATCTTCAAGTATTTGCTGCTCCACGTATAACTCTGAAGCCTTTGGTTCCAAGTTTTCCATGTTTTGCCAATATTTACGTGTCTCTCATGGAGAAGCCTCATGTTGATTTTGGACTAAAACTTTTTGGAGCTGATGTAATGTCTATTCCTGGTGTTTATAGGATTGTCCAGGACACCATTAAAGATCAAGTTGCAAAAATGTATCTATGGCCCAAGGCCTTAGAGGTTCAAATAATGGATCCAACAAAGGCCATGAAAGTGCCAGTTGGAATCCTTCATGTGAAAGTTGTGAGAGCAGAGAAGCTTAAAAAGAAAGATCTACTAGGGGCATCAGACCCTTATGTGAAACTCAAACTCACAGAAGAGAAACTTCCTTCAAAGAAAACAACCTTGAAATACAAGAATTTGAATCCAGAATGGAATGAGGAATTCAGTATAGTTGTCAAAGATCCAGAATCTCAGGTCTTGGAGCTAACTGTTTATGATTGGGAGCAGATTGGCAAGCATGAAAGAATGGGTGTGAATGTCATTCCATTGAAAGAGATTACTACTGATGAGCCAAAAGTAATGACTCTTAATTTACTCAAGACCATGGACCCCAGTGATCCTGAGAATGAGAAGTCACGTGGACAGCTCACTGTAGAAGTTCTATACAAACCCTTTAAGGTGGATGAGTTACCTCTCAATGCGGAAGACTCCAATGGAATAGAAAAGGCTCCTGATGGAACACCTGCCAATGGTGGTTTACTTGTTATTACAGTCCATGAAGCTGAAGATGTTGAAGGAAAACACCACACAAATCCGTTTGCACGGCTGCTATTTCAAGGAGAAGAGAGAAAAACCAAGCATATAAAGAAAAATAGAGATCCAAGATGGGGTGAATCGTTTGAATTTATGCTTGAGGAACCTCCTGCTAATGAGAGACTACATGTTGAAGTGCAAAGTGTCTCCTCAAAGCTTGGCCTTCTGCATCCTAAGGAAAGTTTGGGTTACGTGGATATAAAATTGTCTGATGTTGTTACCAACAAGAGAATCAACGAGAAATATCATCTTATTGACTCAAGAAATGGAAGGATTCAAATTGAGCTTCAGTGGAGAACTCCCTGA 1617 0.4026 MGILSTITSSLGFGVGTSIGLVIGYYLFIYFQPTDVEDPIIQPLVELDPKTLQQLLPEIPSWIKNPDYDRLDWLNKFIEYMWPYLDKAICKTARSIAKPIIAEQIPKYKIDSVEFEELSLGCLPPTFQGMKVYTTDEKELIMEPSVKWAGNPNITVAVKAYGLRATVQVVDLQVFAAPRITLKPLVPSFPCFANIYVSLMEKPHVDFGLKLFGADVMSIPGVYRIVQDTIKDQVAKMYLWPKALEVQIMDPTKAMKVPVGILHVKVVRAEKLKKKDLLGASDPYVKLKLTEEKLPSKKTTLKYKNLNPEWNEEFSIVVKDPESQVLELTVYDWEQIGKHERMGVNVIPLKEITTDEPKVMTLNLLKTMDPSDPENEKSRGQLTVEVLYKPFKVDELPLNAEDSNGIEKAPDGTPANGGLLVITVHEAEDVEGKHHTNPFARLLFQGEERKTKHIKKNRDPRWGESFEFMLEEPPANERLHVEVQSVSSKLGLLHPKESLGYVDIKLSDVVTNKRINEKYHLIDSRNGRIQIELQWRTP 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00065 538 Pfam C2 domain 260 362 IPR000008 -
Phco2g00065 538 Pfam C2 domain 419 521 IPR000008 -
Phco2g00065 538 FunFam Synaptotagmin-2 isoform A 255 410 - -
Phco2g00065 538 CDD C2 262 364 - -
Phco2g00065 538 FunFam Extended synaptotagmin-2 419 537 - -
Phco2g00065 538 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 256 391 IPR035892 -
Phco2g00065 538 CDD SMP_SYT 60 248 - -
Phco2g00065 538 Gene3D C2 domain 419 537 IPR035892 -
Phco2g00065 538 Gene3D C2 domain 257 408 IPR035892 -
Phco2g00065 538 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 249 IPR031468 GO:0008289
Phco2g00065 538 SMART C2_3c 261 361 IPR000008 -
Phco2g00065 538 SMART C2_3c 419 518 IPR000008 -
Phco2g00065 538 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 67 246 IPR039010 -
Phco2g00065 538 PRINTS C2 domain signature 326 334 IPR000008 -
Phco2g00065 538 PRINTS C2 domain signature 304 317 IPR000008 -
Phco2g00065 538 PRINTS C2 domain signature 277 289 IPR000008 -
Phco2g00065 538 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 536 IPR035892 -
Phco2g00065 538 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 7 535 IPR045050 GO:0008289
Phco2g00065 538 ProSiteProfiles C2 domain profile. 240 362 IPR000008 -
Phco2g00065 538 ProSiteProfiles C2 domain profile. 402 519 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00065 Phco-Chr2 651090 654943 Transposed