Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00061 ATGGCATGGTTATTTACTACGACCACATCGAGCTTATCTACTTCGATTTGCAGAACAAAGAGATCCGAACATATCCACCGGTTTGTAACTTATCGTAGCGTTATTATCTTTGCTTCAGAACTTAATAAGAATTTCCAAAAGCTCTATACTAAAGCTATCATAATGGATGCGAAATCAATCCAAACTAAACGGATCTCTTCTTCACTGGTAGAAGCTACTAGAAGCATTGTGTGTGTGCGCACTGCGATGAGGAAGTGGACGGTTGCTTCCGTTCTCCTTCTACTCTCTCTCCTCTTTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGCGGGCGATTCCGACGAGCTTGTAGATCCGCCGAAGGTGGAGGACAAGATCGGCGCTGTTCCTCATGGCCTTTCCACCGATTCAGATGTGGTCAAAAGGGAGGCGGAGTCGATCTCGAAGAGATCTCTTCGGAGCAACGCGGAGAAGTTTGAGTTCCAAGCGGAAGTGTCACGGCTCATGGATATTATCATCAACTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGACGCTTTGGACAAGATTAGGTTCCTCTCTCTCACGGACAAGGAGGTTCTGGGAGAAGGTGATAACACCAAGCTTGATATTCGGATTAAGTTAGACAAGGAAAAGAAAATTCTCTCGATCCGAGACCGGGGTATTGGTATGACAAAGGAGGATTTGATTAAGAATTTGGGGACAATTGCTAAATCTGGAACTTCAGCCTTTGTTGAGAAAATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGTGTCGGCTTTTACTCTGTGTATCTCGTGGCTGACTATGTTGAAGTCGTTAGCAAGCATAATGATGATAAGCAGTATGTATGGGAATCAAAAGCTGATGGAGCTTTTGCAATTTCGGAAGATACATGGAACGAACCTCTAGGACGAGGAACCGAGATTAGACTACACCTCAAAGAAGAGGCTGGGGAGTACTTGGAGGAATCTAAACTGAAAGAATTGGTGAAGAGGTACTCTGAATTTATTAACTTCCCTATCTATCTCTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCAGATGAAGATGATTCCGGTGATGAAGATGATTCTGCTTATGGCAGCTCCAAAGAGGAAACCGAAGACGAAGATGCGGATAAAGGTGAAGATGATGAAGACAAAAAGCCTAAGACAAAGACAGTGAAGGAAACAACTTACGAATGGGAACTTCTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACTGAGGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAATGATGAGAAACCTCTATCGTGGAGTCACTTCACTGCCGAAGGTGATGTAGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAGATTTATATGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGAGTGTTCATTTCAGACGAGTTTGATGAACTGTTGCCCAAGTACCTAAACTTCTTGAGGGGTCTTGTTGATTCTGACACATTACCACTTAACGTATCGCGAGAAATGCTTCAACAACATAATAGTCTAAAGACAATCAAGAAGAAACTTATCAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAAGATCCTGACGAGTCCACTGACAAAGAAAAGAAAGAAGATGCATCCTCTGACAAGGATGAGAAGAAAGGTCAATATGTCAAGTTCTGGAACGAGTTCGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACTAATAGAAATCGGTTGGCAAAATTGCTCAGATTTGAGAGCACCATGTCTGAGGGTAAATTGGCATCCCTGGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGACATCTTTTACATAACCGGAACCAGCAAAGAACAACTGGAAAAATCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAAAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTTGGGAAGGATACTAAAAACAAGGAACTGAAGGAATCCTTTAAGGATCTTACCAAGTGGTGGAAAAGTTCTCTTTCCAAGGACAATGTCGATGATGTGAAGATATCCAACCGATTGGATAACACTCCTTGTGTAGTGGTGACATCAAAATATGGTTGGAGTGCAAACATGGAGCGAATCATGCAGTCTCAAACTTTGTCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTGCTTGAGATCAATCCTAGGCACCCTATTATCAAGGAGCTCCGCGAAAGAGTAGTAAAGAACCCCGAGGATGAGGGTGTAAAACAAACAGCACAGCTGATGTACCAGACTGCACTCTTCGAAAGTGGCTTCCTGCTTGATGATCCCAAGGATTTTTCTTCCCGTATTTATGATTCGGTGAAGTCTAGCTTGGACATCAGTCCTGAAGCAACAGTTGAAGAGGAAGATGACACCGAAGCGGAGGCTGAAAGTGAGGCAAAAGAAGATACTCCAAAGCCTGAAGTTGATGATGATGTCGACGATACCAAAGACGAGTTGTAG 2697 0.4297 MAWLFTTTTSSLSTSICRTKRSEHIHRFVTYRSVIIFASELNKNFQKLYTKAIIMDAKSIQTKRISSSLVEATRSIVCVRTAMRKWTVASVLLLLSLLFLFADQGRKFQANAAGDSDELVDPPKVEDKIGAVPHGLSTDSDVVKREAESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLDIRIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVVSKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLEESKLKELVKRYSEFINFPIYLWASKEVDVEVPADEDDSGDEDDSAYGSSKEETEDEDADKGEDDEDKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFNDEKPLSWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFDELLPKYLNFLRGLVDSDTLPLNVSREMLQQHNSLKTIKKKLIRKALDMIRRIADEDPDESTDKEKKEDASSDKDEKKGQYVKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTMSEGKLASLDQYISRMKAGQKDIFYITGTSKEQLEKSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKNKELKESFKDLTKWWKSSLSKDNVDDVKISNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDEGVKQTAQLMYQTALFESGFLLDDPKDFSSRIYDSVKSSLDISPEATVEEEDDTEAEAESEAKEDTPKPEVDDDVDDTKDEL 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00061 898 SMART HKATPase_4 182 339 IPR003594 -
Phco2g00061 898 MobiDBLite consensus disorder prediction 570 590 - -
Phco2g00061 898 MobiDBLite consensus disorder prediction 375 416 - -
Phco2g00061 898 SUPERFAMILY HSP90 C-terminal domain 729 851 IPR037196 -
Phco2g00061 898 SUPERFAMILY Ribosomal protein S5 domain 2-like 431 710 IPR020568 -
Phco2g00061 898 MobiDBLite consensus disorder prediction 856 898 - -
Phco2g00061 898 PIRSF HSP90_HTPG 136 897 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco2g00061 898 FunFam Heat shock protein 90 151 385 - -
Phco2g00061 898 FunFam endoplasmin homolog 623 710 - -
Phco2g00061 898 ProSitePatterns Heat shock hsp90 proteins family signature. 180 189 IPR019805 GO:0005524|GO:0006457|GO:0051082
Phco2g00061 898 CDD HATPase_Hsp90-like 169 359 IPR020575 -
Phco2g00061 898 Hamap Chaperone protein HtpG [htpG]. 157 853 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 345 363 IPR020575 -
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 327 344 IPR020575 -
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 275 297 IPR020575 -
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 232 249 IPR020575 -
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 160 180 IPR020575 -
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 250 267 IPR020575 -
Phco2g00061 898 PRINTS 90kDa heat shock protein signature 181 203 IPR020575 -
Phco2g00061 898 FunFam endoplasmin homolog 430 622 - -
Phco2g00061 898 Gene3D - 717 863 IPR037196 -
Phco2g00061 898 Gene3D - 623 710 - -
Phco2g00061 898 FunFam Endoplasmin-like isoform B 717 863 - -
Phco2g00061 898 Gene3D - 430 622 - -
Phco2g00061 898 Pfam Hsp90 protein 341 881 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco2g00061 898 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 153 876 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Phco2g00061 898 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 183 338 IPR003594 -
Phco2g00061 898 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 160 369 IPR036890 -
Phco2g00061 898 MobiDBLite consensus disorder prediction 861 876 - -
Phco2g00061 898 Gene3D - 147 381 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00061 Phco-Chr2 630603 637621 Dispersed