Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00060 ATGGATTGCTTCTCCATACACATTGCTCTCATCTGGCTTTTCATTTTCAAAGGTGCTTCAGGTGCAACATTTACTCTTATAAACAAATGTGATTACACAGTGTGGCCTGGGATTTTGGCCAATGCAGGGAGCTCCGGATTGGATTCAACCGGGTTTCAACTCCAACCGGGTGGGTCACGGATCTTCCACGCACCGCCAAATTGGTCCGGAAGATTCTGGGGAAGAACCGGGTGCAATTTTGACCCGAATACCCAACAGGGTAGTTGCACAACGGGAGACTGTGGCTCCAATCAGGTAGAATGCAACGGGGGCGGGGCAAGTCCACCCGCCACATTGGCGGAGTTCACGATCGGGTCGGGTTCGGGCACGCAGGACTTTTATGATGTGAGTCTCGTTGACGGTTACAACTTGCCGTTAATTGTGGAGCCCAGTGGCGGATCAGGTACGTGCGGGTCTACCGGGTGCGTTGCGGACCTGAACCAACGGTGCCCCAACGAGTTACGCGTGGCGGATCGCGCCGCGTGTAGGAGCGCCTGCGACGCGTTTCGGAGCCCCGAGTATTGCTGCAGCGGCGCGTACGGTTCACCGGCGACATGCAAGCCTTCGATTTATTCGCAGGTATTCAAATCCGCGTGTCCGAAATCGTATAGCTACGCATACGACGACGCTACGAGTACGTTTACGTGTACGGGAGCTGATTATACCATTACATTCTGCCCTTCAACCACAAGCCAAAAATCGGCAAGAGATTCACCACCTCCTCCAACTGGAATTGGGTCAGAAACAGGGACAGGGGAGATGCCATTGATAGTTAACAGTCCATGGTTTCCCAACTTTTTCACTGGACTCTCATCCAACTCTCATGCATGTCCCTTGCCATTCATTGTTACACTCACTGTGCTAATCTTCTTCTCTTTGCATAACTCATAG 930 0.5237 MDCFSIHIALIWLFIFKGASGATFTLINKCDYTVWPGILANAGSSGLDSTGFQLQPGGSRIFHAPPNWSGRFWGRTGCNFDPNTQQGSCTTGDCGSNQVECNGGGASPPATLAEFTIGSGSGTQDFYDVSLVDGYNLPLIVEPSGGSGTCGSTGCVADLNQRCPNELRVADRAACRSACDAFRSPEYCCSGAYGSPATCKPSIYSQVFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSTTSQKSARDSPPPPTGIGSETGTGEMPLIVNSPWFPNFFTGLSSNSHACPLPFIVTLTVLIFFSLHNS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00060 309 ProSiteProfiles Thaumatin family profile. 21 240 IPR001938 -
Phco2g00060 309 SMART tha2 24 240 IPR001938 -
Phco2g00060 309 MobiDBLite consensus disorder prediction 242 263 - -
Phco2g00060 309 SUPERFAMILY Osmotin, thaumatin-like protein 22 241 IPR037176 -
Phco2g00060 309 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Phco2g00060 309 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Phco2g00060 309 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Phco2g00060 309 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Phco2g00060 309 FunFam THAUMATIN-LIKE PROTEIN 1 22 240 - -
Phco2g00060 309 Gene3D Thaumatin 22 240 IPR037176 -
Phco2g00060 309 PANTHER OS03G0233200 PROTEIN 11 240 IPR001938 -
Phco2g00060 309 CDD TLP-PA 23 239 - -
Phco2g00060 309 Pfam Thaumatin family 28 240 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00060 Phco-Chr2 626894 628382 Tandem