Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00059 ATGGATCGCATCGCATTCTTGTCACTGTTCCCATTCTTTCTAACATTTTATCTATCACCATCTGGGGTGATTTCAACAACATTCACTCTAGTTAACAAATGTGATTACACGGTGTGGCCGGGGATACTCTCAAACGCTGGTGTTCCTCCTCTTTCAACCACCGGTTTCGTTCTACAAACCGGTGCGTCCACCACAATCGCCGCACCTACGTCTTGGGGAGGTCGTTTCTGGGGCCGAACACTCTGCTCCGAAGACTCCACAGCCAAGTTCACCTGCGTCACCGGCGACTGTGGCTCCGGCAAGCTCGAATGCGCTGGCAGCGGCGCCGCTCCACCGGCTACACTGGCGGAATTCACCCTCGACGGTGCCGGAGGCCTTGATTTCTTCGACGTAAGCCTTGTGGACGGCTACAACGTGCCGATGTTGGTGGTGCCACTAGGAGGCTCCGGCGAGAAGTGCACCGCCACGGGGTGCGTCGGGGACCTCAACGACGCGTGTCCGTCGGAGCTGAAGGTTATGAGCGCGGACGGGAGAGAGGGCGTCGCGTGCAAGAGCGCGTGCGAGGCATTCAACTCGCCGCAGTACTGCTGCAGCGGCGCGTACGGCTCGCCCGACACGTGCAAGCCCTCGTCTTACTCTGAGATATTCAAGAACGCATGCCCACGCGCTTATAGCTACGCGTACGACGACAAAACCAGCACCTTCACCTGCGCTTCCGCCGATTACACCATCACCTTTTGCCCTTCCCCCACCACCAGCCAAAAGGCGTCACAGGAACAACAGAATGGTTCTTCCGCCACCACGCCACTTCTTAACAACGGCACCATGGTGTACGAAGGTGGTTTCGATCAGAGTGAAATCTCGTGGGCCACCTCCAGCCACGTGTTCCAATCGCGAGCCGTTGCCGGCATAGTCGGTGTCGCTATGGCAATGTGGCGGTTCAGCCAGCTCTTCTAA 957 0.5778 MDRIAFLSLFPFFLTFYLSPSGVISTTFTLVNKCDYTVWPGILSNAGVPPLSTTGFVLQTGASTTIAAPTSWGGRFWGRTLCSEDSTAKFTCVTGDCGSGKLECAGSGAAPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPLGGSGEKCTATGCVGDLNDACPSELKVMSADGREGVACKSACEAFNSPQYCCSGAYGSPDTCKPSSYSEIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPSPTTSQKASQEQQNGSSATTPLLNNGTMVYEGGFDQSEISWATSSHVFQSRAVAGIVGVAMAMWRFSQLF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00059 318 Gene3D Thaumatin 26 248 IPR037176 -
Phco2g00059 318 Pfam Thaumatin family 32 248 IPR001938 -
Phco2g00059 318 PIRSF PR5 1 287 IPR001938 -
Phco2g00059 318 FunFam THAUMATIN-LIKE PROTEIN 1 26 248 - -
Phco2g00059 318 ProSiteProfiles Thaumatin family profile. 25 248 IPR001938 -
Phco2g00059 318 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Phco2g00059 318 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Phco2g00059 318 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Phco2g00059 318 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Phco2g00059 318 CDD TLP-PA 27 247 - -
Phco2g00059 318 PANTHER OS03G0233200 PROTEIN 14 248 IPR001938 -
Phco2g00059 318 SMART tha2 28 248 IPR001938 -
Phco2g00059 318 MobiDBLite consensus disorder prediction 253 272 - -
Phco2g00059 318 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00059 Phco-Chr2 619177 620939 Tandem