Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00045 ATGGCTGCAACAACACCGAATCACACAGTAACTGTATCTGGGTGGGCAGCACACGATTCTTCCGGCAAGATTAGCCCCTACACCTTCAAAAGAAGGGAGAATGGTGTTAACGATGTAACCATAAAGATCTTGTACTGTGGGATCTGCCACACGGATCTCCACTATGCTAAAAACGAATGGGGCATCACCATGTACCCTGTGGTACCAGGGCACGAGATCGTTGGGGTGATAACAGAGACAGGAAGCGATGTGAAGGGGTTCAAGGAAGGAGACAGAGTGGGTGTGGGGTGTATGGCAGCTTCATGTTTGGATTGTGAACACTGCAAGACCGATCAGGAAAACTACTGTGAGAAGATGGTATTCGTGTACAACGGAATCTTCTGGGATGGCAGCATCACCTACGGTGGCTACTCCCAACTCATTGTTGCAGATCACAGGTATGTGGTACACATTCCGGAGAACCTACCAATGGATGCGGCGGCTCCTCTACTGTGCGCCGGAATAACAGTGTACACTCCTTTGAAAGATCACGATCTGGTGGCGTCGGGGGGGAAAAAGATTGGGGTGGTTGGTTTGGGAGGGCTGGGACACTTAGCCGTTAAATTTGGGAAGGCATTTGGGCACCATGTTACTGTGATTAGCACTTCTCCTTCGAAAGAGGTGGAAGCTAAGCAACGTTTGGGTGCTGATGATTTCATAGTCAGCACCAACCCTGAACAGTTAGAGAAAGCAAAGAGAAGCATTGATTTCATATTGGACACTGTTTCTGCAGAGCATTCTCTCTTACCCATCTTGGAATTGCTGAAAGTGAACGGCACCTTATTTCTGGTTGGAGCACCCGACAAGCCCCTCCAACTGCCTGCTTTTCCATTGATTTTCGGGAAGAGAGCAGTAAAAGGTGGGATAATAGGAGGAATAAAAGAGACTCAGGAAATGTTGGATATGTGTGCCAAGTACAACATAACCAGTGACATTGAGTTGATCACAGCAGATAGAATCAACGAAGCTATTCAACGTCTTGCCAAGAATGATGTTCGCTACCGTTTCGTGATTGACATTGCTGCTGCTTCTGCCACTTCCAACGTCTAG 1089 0.4775 MAATTPNHTVTVSGWAAHDSSGKISPYTFKRRENGVNDVTIKILYCGICHTDLHYAKNEWGITMYPVVPGHEIVGVITETGSDVKGFKEGDRVGVGCMAASCLDCEHCKTDQENYCEKMVFVYNGIFWDGSITYGGYSQLIVADHRYVVHIPENLPMDAAAPLLCAGITVYTPLKDHDLVASGGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEVEAKQRLGADDFIVSTNPEQLEKAKRSIDFILDTVSAEHSLLPILELLKVNGTLFLVGAPDKPLQLPAFPLIFGKRAVKGGIIGGIKETQEMLDMCAKYNITSDIELITADRINEAIQRLAKNDVRYRFVIDIAAASATSNV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00045 362 SMART PKS_ER_names_mod 22 351 IPR020843 GO:0016491
Phco2g00045 362 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Phco2g00045 362 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Phco2g00045 362 CDD CAD1 14 352 IPR047109 GO:0016616
Phco2g00045 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Phco2g00045 362 Gene3D - 15 353 - -
Phco2g00045 362 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Phco2g00045 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Phco2g00045 362 SUPERFAMILY GroES-like 17 183 IPR011032 -
Phco2g00045 362 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Phco2g00045 362 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Phco2g00045 362 Gene3D - 166 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00045 Phco-Chr2 525416 526838 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00045 2 525416 526838 Phco2g00045 2 525416 526838 ECH