Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00036 ATGAGAATCATGGGAGTGGGGTTCTCAAAGGTGTTAACACACACATCAGATGATGAAATTCCAATTTCTTCCACAGATTCTGCTCCTCAACTCACCTACAAACAACCTCGCAAAAACCTCCCTGTTCCACCTCCGTTTCCTCCTCCCATGCCAACCCTATGTTCTTCACAAACAGGACCTGTTCTGGGGAAGCCTTACGTTAAAATAAAGCACATGTACGAGATGAAGAAAGAGCTGGGAAGAGGCAACTTTGGTGTGACTTATCTGTGTGTAGAGAAGGCCACAGGAATTGCCTATGCATGCAAATCCATATCAAAGAAGGGGCCACAAGAAGTTAAGAATCTTAGAAGAGAAGTTATGATTCTGCAGCATCTTTCAGGGCAACATAACATAGTGGAATTCAAGGGAGCTTATGAGGACAGGGAGAACGTGCATCTTGTGATGGAGTTGTGCAGTGGAGGTGAACTCTTTCACCGTATCATTGCCAAAGGTAGACACTCCGAGCGTGATGCAGCCACAGTTATGAGACAGATTGTGAGGGTTGTTGACGTGTGCCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCAAGGACGAGGATTCCCCTTTGAAACTCACGGATTTTGGATTCTCTGTCTTCTTTCACACTGGTGAGGTGCATAAAGATATTGTTGGAAATGCATGTTACGTAGCTCCAGAGGTTTTGAAACGGAATTATGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCATTTTATACATCCTCTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACTGAGAAAGGCGAGTTAGTTGATGCTTTGGGTGGTAAACTAGATATGGACAGCGAGCCATGGCCTACTATCTCGGACGCTGCAAAAGATTTGATCAGAAAAATGCTTACTTATGACCCTAAGGAACGGATTACAGCGGCTGTGGCCCTTGAACATCCGTGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATCCAGACAGTGCTGTTTTAATTAGGATGAAACAGTTCAAAGCAATGAACCAGATGAAGAAGCTTGCCTTGAAGGTAATAGCAGAAAACCTTTCAGAGGAAGAAACAAAGGGCCTGAGACAAATGTTCAACAGTATGGATACTGATGGCAGTGGCACTATCACATTTGAAGAACTCAAAGCTGGATTATACAGATTGGGTTCCCTGCTTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTATTGGTAATGACAAAAGTGGAACAATTAAATACAGTGAATTCGTTGCTGCCACCATGGATCGACATAAAATGGAGAAGGGGGGGAATCTGTTCAAGGCTTTTCAATACTTTGACAAGGATGACAAGGGTTATATAACGGGAGATGAACTTAGGGAAGCTATCACTGAACACCAAAGGGGAGAAGAAGCTGCGATAGATGATGTCTTCGAGGATGTAGACTCAGACAAAGATGGGAAAATTAATTATGAGGAGTTTATGAGAATGATGAGAAACGAATGCTGA 1536 0.4349 MRIMGVGFSKVLTHTSDDEIPISSTDSAPQLTYKQPRKNLPVPPPFPPPMPTLCSSQTGPVLGKPYVKIKHMYEMKKELGRGNFGVTYLCVEKATGIAYACKSISKKGPQEVKNLRREVMILQHLSGQHNIVEFKGAYEDRENVHLVMELCSGGELFHRIIAKGRHSERDAATVMRQIVRVVDVCHFMGVMHRDLKPENFLFATKDEDSPLKLTDFGFSVFFHTGEVHKDIVGNACYVAPEVLKRNYGKEIDVWNAGVILYILLSGVPPFWAETEKGELVDALGGKLDMDSEPWPTISDAAKDLIRKMLTYDPKERITAAVALEHPWLKEGGEASEKHPDSAVLIRMKQFKAMNQMKKLALKVIAENLSEEETKGLRQMFNSMDTDGSGTITFEELKAGLYRLGSLLSESEIRQLLNAIGNDKSGTIKYSEFVAATMDRHKMEKGGNLFKAFQYFDKDDKGYITGDELREAITEHQRGEEAAIDDVFEDVDSDKDGKINYEEFMRMMRNEC 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00036 511 CDD STKc_CAMK 73 327 - -
Phco2g00036 511 FunFam Calcium-dependent protein kinase 5 156 336 - -
Phco2g00036 511 MobiDBLite consensus disorder prediction 18 34 - -
Phco2g00036 511 SUPERFAMILY EF-hand 367 507 IPR011992 -
Phco2g00036 511 ProSiteProfiles Protein kinase domain profile. 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00036 511 Pfam Protein kinase domain 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00036 511 ProSiteProfiles EF-hand calcium-binding domain profile. 443 477 IPR002048 GO:0005509
Phco2g00036 511 Gene3D - 354 507 - -
Phco2g00036 511 Pfam EF-hand domain pair 376 436 IPR002048 GO:0005509
Phco2g00036 511 Pfam EF-hand domain pair 448 508 IPR002048 GO:0005509
Phco2g00036 511 FunFam Aurora kinase A 66 154 - -
Phco2g00036 511 Gene3D Transferase(Phosphotransferase) domain 1 156 346 - -
Phco2g00036 511 MobiDBLite consensus disorder prediction 18 42 - -
Phco2g00036 511 ProSiteProfiles EF-hand calcium-binding domain profile. 478 511 IPR002048 GO:0005509
Phco2g00036 511 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
Phco2g00036 511 Gene3D - 347 437 - -
Phco2g00036 511 Gene3D Phosphorylase Kinase; domain 1 75 155 - -
Phco2g00036 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Phco2g00036 511 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Phco2g00036 511 SMART serkin_6 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00036 511 SMART efh_1 411 439 IPR002048 GO:0005509
Phco2g00036 511 SMART efh_1 482 510 IPR002048 GO:0005509
Phco2g00036 511 SMART efh_1 375 403 IPR002048 GO:0005509
Phco2g00036 511 SMART efh_1 447 475 IPR002048 GO:0005509
Phco2g00036 511 FunFam Calmodulin A 365 510 - -
Phco2g00036 511 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Phco2g00036 511 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Phco2g00036 511 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Phco2g00036 511 PANTHER SERINE/THREONINE-PROTEIN KINASE 68 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00036 Phco-Chr2 467837 470760 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco2g00036 Pkinase 6.8e-71 CL0016