Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00011 ATGAATCGGGTCGTGGAGAAGCATGAGACTCTCGTGGAAGGTGTGAGTGGGAGGATTGTGGAGATGAGCATGAAAGAAAGCAAAAAAGTGGATGAAAGAGAGGTTATACCCCTGCTCACCCCATACAAGATGGGAAATTTTAATCTATCCCACAGGATTGTGTTGGCACCGTTAACACGATCCAGGTCTTACAACTTCGTCCCTCAGCCGCATGCTGTTCTGTATTATTCTCAGAGAGCAACTAAGGGTGGCTTCTTGATTGGGGAGGCCTCCGGGGTGTCTCCTACAGCACAGGGGTACCCTAACACGCCTGGGATTTGGACAAGAGAACAGGTGGAAGCTTGGAAACCCATTGTGAGCGCTGTTCATGAAAAGGGAGCTATTTTCTTTTGTCAACTCTGGCATGCCGGAAGAGTCTCTAACTGTGAATACCTACCAGATGGCGAGGCCCCGATATCAAGCACAGAGAAGCGACTTCGTAAGGATATTGCCAACAATAAAGCAACAGCTGATAGATACGCAACTCCTCGTCGGGTGAGAACCGATGAAGTCCCCAAGCTTGTCAATGACTTCGTAATTGCTGCTAAAAATGCCATCGAAGCAGGTTTTGATGGAGTGGAGCTACACGGAGCGAACGGGTACTTACTGGATCAGTTCCTGAAGGATGAGGTGAACGACAGAGATGACGAATACGGAGGTACCTTAGAAAATCGTTGCCGCTTCCCACTGCTAGTGGTGAAGGCAGTGGCTGATGCGATTGGAGCTGACAAGGTTGGGATTAGGCTCTCTCCATTCGCTGATTATAATGACTGTGGAGACTCTGACCCTCAGGCATTGGGGCAATACATGGCTGAGTCATTGAATGAAGTGGACATTCTGTATATTCACTTGATTGAGCCTAGGATGGTAACACAATTCCAGAGGTTTGAGACCAATTGGTCCCTAACACCAATGAGGGAGGCCTTCAAGGGGACTTTTATTGTGGCTGGTGGTTATGATAGGAGTGAGGGAAATGAGGCTATATCTACCGCTGCCGCGGATTTGGTCGCTTATGGACGCCTCTTTTTGGCCAATCCAGATCTCCCCGCAAGATTTGAAGTGGATGCTGAGTTAAACCAACCCGATGCCACCACCTTTTACACGCATCACCCTGTTCTTGGATATACCGATTATCCTTTTCTTCACCATATATAA 1194 0.4816 MNRVVEKHETLVEGVSGRIVEMSMKESKKVDEREVIPLLTPYKMGNFNLSHRIVLAPLTRSRSYNFVPQPHAVLYYSQRATKGGFLIGEASGVSPTAQGYPNTPGIWTREQVEAWKPIVSAVHEKGAIFFCQLWHAGRVSNCEYLPDGEAPISSTEKRLRKDIANNKATADRYATPRRVRTDEVPKLVNDFVIAAKNAIEAGFDGVELHGANGYLLDQFLKDEVNDRDDEYGGTLENRCRFPLLVVKAVADAIGADKVGIRLSPFADYNDCGDSDPQALGQYMAESLNEVDILYIHLIEPRMVTQFQRFETNWSLTPMREAFKGTFIVAGGYDRSEGNEAISTAAADLVAYGRLFLANPDLPARFEVDAELNQPDATTFYTHHPVLGYTDYPFLHHI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00011 397 SUPERFAMILY FMN-linked oxidoreductases 37 394 - -
Phco2g00011 397 FunFam 12-oxophytodienoate reductase 3 31 397 - -
Phco2g00011 397 Gene3D Aldolase class I 24 397 IPR013785 -
Phco2g00011 397 CDD OYE_like_FMN 37 375 - -
Phco2g00011 397 PANTHER NADH OXIDOREDUCTASE-RELATED 34 394 IPR045247 GO:0010181|GO:0016491
Phco2g00011 397 Pfam NADH:flavin oxidoreductase / NADH oxidase family 38 370 IPR001155 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00011 Phco-Chr2 146307 149886 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00011 2 146307 149886 Phco2g00011 2 146307 149886 ECH