Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00010 ATGCACTTGAGCGAGAACGAAGGGATAGAGGGGAAGGTCTTCGTGGTGACGGGTGGACTCGGATTCGTAGGGTCTGCTCTCTGCTTGGAGCTCATTCGAAGAGGTGCAAGAGAGGTGCGAGCCTTTGACCTCCGCCCCTCTTCTCCTTTTTCCCCTGCTCTCCGTGACAAGGGAGTCCGCTGCATCCAAGGTGATGTTGGCCGCAAAGAAGACGTGGAAAGGGCCCTCCGCGGTGCCGATTGTGTTTTCCACCTTGCGGCCTTTGGAATGTCAGGTAAAGAGATGCTCCAGTTTGGTCGTGTTGATGAAGTCAACATAAATGGGACCTGCCATGTTCTCGACGCTTGTATCGACCTCGGCATCACAAGGCTTGTCTACTGTAGCACTTACAATGTTGTCTTCGGTGGTCAACAGATCATCAACGGAAATGAGGCATTACCTTATTTCCCAATTGATCACCATGCCGATCCATATGGCCGTAGTAAATCAATTGCTGAGCAGTTGGTTCTAAAGAACAATGCCCGCGCTCTCAAGAACCACTCCGGAAATCGTCTTTACACTTGTTCTGTTCGTCCAGCTGCAATCTATGGACCGGCAGAAGACAGGCACCTTCCAAGGATCGTAACCATGGCAAAGCTGGGTCTCCTTTTGTTCAGAATTGGCGACCAAACTGTAAAATCAGATTGGCTTTTTGTGGATAACCTTGTCCTTGCTCTTATATTGGCCAGCATGGGACTTTTGGATGACAATCATAACCCGGCAAAACGTCCTGTAGCTGCTGGCCAGGCCTACTTTATATCTGATGGTTCACCGGTCAATTCTTTTGAATTCCTACAGCCTCTACTTAGGAGTTTGGATTATGAACTACCAAAGACTTCCCTACCTGTCGATCGGGCTCTTGTTCTTGGGAGGATTTGCTGGGCTGTTTATACAATCCTATATCCATGGCTCAATCGGTGGTGGCTTCCACAACCATTCATCCTTCCCTCTGAAGTACACAAGGTGGGCGTCACCCATTATTTCTCTTATCTTAAAGCCAAAGAGGAGATTGGCTATGTTCCCATGGTGACCTCGCGTGAGGGGATGGCTTTGACCATATCTTACTGGCAACAGAGGAAAAGAGCGACTTTGGATGGACCAACGATCTACGCGTGGTTGTTTTGTGTCATTGGAATGATCTCACTCTTTTGCGGTGCTTTCTTACCTGACATAGGAATCGTGTTCCTTCTCAGAGCTATATATCTATTTGTCTTTCGATCAATGTGGGTGACAAGGCTGGTGTTTCTTCTGGCTACAACTGCACATATTGCTGAGGCCATTTATGCATGGTACCTGGCTCAAAGGGTGGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTCTTGGGATGTTTTCGTTGCGCCTCCTTTTGAAAAGAGCGAGGACATAA 1437 0.4823 MHLSENEGIEGKVFVVTGGLGFVGSALCLELIRRGAREVRAFDLRPSSPFSPALRDKGVRCIQGDVGRKEDVERALRGADCVFHLAAFGMSGKEMLQFGRVDEVNINGTCHVLDACIDLGITRLVYCSTYNVVFGGQQIINGNEALPYFPIDHHADPYGRSKSIAEQLVLKNNARALKNHSGNRLYTCSVRPAAIYGPAEDRHLPRIVTMAKLGLLLFRIGDQTVKSDWLFVDNLVLALILASMGLLDDNHNPAKRPVAAGQAYFISDGSPVNSFEFLQPLLRSLDYELPKTSLPVDRALVLGRICWAVYTILYPWLNRWWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYVPMVTSREGMALTISYWQQRKRATLDGPTIYAWLFCVIGMISLFCGAFLPDIGIVFLLRAIYLFVFRSMWVTRLVFLLATTAHIAEAIYAWYLAQRVDPANARGWFWQTFALGMFSLRLLLKRART 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00010 478 Pfam Transmembrane protein 254 387 473 IPR028110 -
Phco2g00010 478 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 295 IPR002225 GO:0003854|GO:0006694|GO:0016616
Phco2g00010 478 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 14 371 - -
Phco2g00010 478 Gene3D - 3 375 - -
Phco2g00010 478 FunFam Short-chain dehydrogenase/reductase family 42E member 1 3 375 - -
Phco2g00010 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 372 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00010 Phco-Chr2 143249 145135 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00010 2 143249 145135 Phco2g00010 2 143249 145135 ECH