Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01918 ATGTCTTTCGAAGATGTTAAGGCTGCTGCTAGTGAGTTCGCTAGGGGATTTAATCACAGTTACTACCACCCGTTGCACATAGCAATACTAAAAGGAGATTGGCAATCTACAAAGGCTTTTCTTGACAATGATCCAAGTGCATGGACTGCAAAGATCACCATACTTGGCAGGACTGCGCTGCATGTTGCAGCTGTAGGAGGGCAGTGGCAAATTGTTGAGAAGTTGGTGCAACATGTTCCTGCACAAGTACTTGAAGAGCTGGACTTGATGGGTTGTACTTGCCTGCACTATGTTGCAATGGGGGAAAGCAGAAGTGCTGCCAAGGCGTTGATGGCTAAAAATCCTTCTCTGACACAACTCACTGACTTTAAAGGATTCACACCACTTATCTACAGTATTACCTCTGCTAGATGCAAAGAAATGGTATGGTACTTTGTTTTGAATACTACAGATGAGAGACCTGGCTCTCCTTTCTCTGGTCCTTCTGCTGGTCAACTTGTTGCTTTGCTTACAGCTGCTGGATTTCATGATGTCACTATATATCTTCTCCAGCGCTACCCAAATTTGGCTACTCTCTCAGATTCCAAGGGAAGCATTATACTTAATGTTTTGTCAAAATTGCCCTCGGACTTTCAAAGTGGAAATAAGCTTGGGTTTTGGAAAAGATGCATTTACCACTGTGTGCCAGATGAACTTGATTTTTTACCACCAAGTCATTTGAGAGGAAATTTGAAAGATTCTTTTGGGAATTCAAGCCATCACCAATCTTATTTTGGAAGCACAATGTGGAATGGAATTCAGAATATTGTTCCTGGCATAAAGCTAGTCAGAGAGGCAAAGTTGAGACACGTATCTGCTGCGAGATTGGTCGAACTCGTTTGCACACAGGTTTCAAATTTGAATGATGCTGAATTCTGGCAGTCTTTTGTGAATGCAGACATTGTTTTCAATGCCTCATCATCAGGCATAGTTGAAATTTTAAGGATCTGTTTCCAGTTTTTTCCTGATTTGGTTTGGACTCACATGCCAAACGAAGGATATGTAGCTCAAACTGCCATCAAGTATAGGCAAGAGAAGGTTTTTAGTCTTCTATGCAAGATGCCTATAGTTTGCAAGTTTTTAATCCTGGCATTAGATGAATCACAAAACACCACATCACATCTAGCAGCAAGGTTTGCTTCTCCTCAACAGGCTTCAATTTCTGGTGCAGCCTTTCAAATGCAAAAAGAGTTGCAGTGGTTTAAGGAAGTAGAGAAATGGGATCACCCTCTTCATAAAGAAGTTAAAAACAAAGATGGTAAAACACCTTGGCAATTGTTCAGGGAAGAGCACAAGCCCTTGCTTGAAGAAGCAAAGACTTGGATGAAAGATACATCAAACTCTTGTATGTTGGTGGCAACTCTTATTGCTACAGTGGTCTTTGCTGCTTCTATAACAGTACCTGGAGGAAACAACCAAGAGAAAGGATTTCCATTATTCTTGTCAGATAACACATTCATGGTGTTCATTGTGTCAGATACATTAGCTTTGTTTGCCTCCATGGTTTCCCTTTTGATGTTTTTATCAATTCTAACTGCACATTATGCAGAAGAAGATTTTCTCAAGAGATTACCTGAGAGAATAATACTGGGTCTGGCTTCTTTGTTCTTTTCCATAGTAACTACAATGATAGCATTTGGTGCAGGTCTGGATTTGTTGCTAAGGGAGAGACTGAAATGGGTGTCAATCCCAATAGCTCTTCTGGCATGTGTTCCAGTTGCCTTATTTGCACGGCTTCAACTTCCCTTGTTCATGCAAATGATCATTTCAACTTATGGTTCTTGTATATATCATCGTCAAAGTCTTTGGTAA 1851 0.4068 MSFEDVKAAASEFARGFNHSYYHPLHIAILKGDWQSTKAFLDNDPSAWTAKITILGRTALHVAAVGGQWQIVEKLVQHVPAQVLEELDLMGCTCLHYVAMGESRSAAKALMAKNPSLTQLTDFKGFTPLIYSITSARCKEMVWYFVLNTTDERPGSPFSGPSAGQLVALLTAAGFHDVTIYLLQRYPNLATLSDSKGSIILNVLSKLPSDFQSGNKLGFWKRCIYHCVPDELDFLPPSHLRGNLKDSFGNSSHHQSYFGSTMWNGIQNIVPGIKLVREAKLRHVSAARLVELVCTQVSNLNDAEFWQSFVNADIVFNASSSGIVEILRICFQFFPDLVWTHMPNEGYVAQTAIKYRQEKVFSLLCKMPIVCKFLILALDESQNTTSHLAARFASPQQASISGAAFQMQKELQWFKEVEKWDHPLHKEVKNKDGKTPWQLFREEHKPLLEEAKTWMKDTSNSCMLVATLIATVVFAASITVPGGNNQEKGFPLFLSDNTFMVFIVSDTLALFASMVSLLMFLSILTAHYAEEDFLKRLPERIILGLASLFFSIVTTMIAFGAGLDLLLRERLKWVSIPIALLACVPVALFARLQLPLFMQMIISTYGSCIYHRQSLW 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01918 616 ProSiteProfiles Ankyrin repeat profile. 55 78 IPR002110 GO:0005515
Phco11g01918 616 Gene3D - 5 156 IPR036770 -
Phco11g01918 616 PANTHER CASKIN 53 606 - -
Phco11g01918 616 ProSiteProfiles Ankyrin repeat region circular profile. 55 78 - -
Phco11g01918 616 SUPERFAMILY Ankyrin repeat 24 251 IPR036770 -
Phco11g01918 616 Pfam Domain of unknown function 453 563 IPR026961 -
Phco11g01918 616 SMART ANK_2a 55 84 IPR002110 GO:0005515
Phco11g01918 616 SMART ANK_2a 90 119 IPR002110 GO:0005515
Phco11g01918 616 SMART ANK_2a 20 51 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01918 Phco-Chr11 15604611 15608828 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01918 11 15604611 15608828 Phco11g01918 11 15604611 15608828 ECH