Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01647 ATGATAAAAGCTTACCATGTATATGCTTCAGTGTGCCCGTTTGAAAAGATTACAGTCATGTTTGCCAACAAATCAATTTATAGTCTTGCTGAGAATGCAGAAACAATTCATATCATAGACTTTGGTATCCGCTATGGCTTCAAGTGGCCTTCACTTATCAGCGAAATATCAAGACGTCCTGGTGGACCGCCCAAGCTACGCTTCACGGGGATAGATCAGCCACAGCCAGGTTTCAGGCCAGAGGAGAGGGTGCTGGAGACGGGGCGTAGACTTGAAAATTATTGCAAGCGTTTCAACGTTCCATTTGAGTTCAATGCTATTGCAAGAAAATGGGACACTATCAGAATTGAGGACCTCAAGATAGAGAAAAACGAATTTGTAGCTGTGAAGTGCATGTTTCAGTTGGAGCATCTACTTGACGAGTCTGTGGTGTTGGATAATCCAAGGGATGGTGTTTTGAGGTTGATTAAGAAGGCAAATCCTGACATATTTGTGCACAGCATTGTCAACGGCTCCCATGATGTACCATTCTTTGTGTCAAGGTTCAGAGAGGCTCTCTTTCACTACTCTGCAGTGTTTGATATGCTTGACAGCAACCTTGATCGTGAAGATCCCAGCAGGCTGATGTTTGAGAAGGAGTTGTTTGGACAGGAGATCATGAACATCATAGCTTGTGAAGGTTGTGAGAGGATTGAGAGGCCACAAACATTCAAGCAATGGCAGCTTCATAACATGAGAATTGGGTTTCGGTTACTTCCTTTGAATCAACGAGTCATTGATAGATTAAAGAAAAGGTTGAGAGATGATGCACACAACACCAATTTCATGCTTGAGGTGGATGGTGATTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTACATGCTTCTTCTTGTTGGATTCCGGCATAG 909 0.4345 MIKAYHVYASVCPFEKITVMFANKSIYSLAENAETIHIIDFGIRYGFKWPSLISEISRRPGGPPKLRFTGIDQPQPGFRPEERVLETGRRLENYCKRFNVPFEFNAIARKWDTIRIEDLKIEKNEFVAVKCMFQLEHLLDESVVLDNPRDGVLRLIKKANPDIFVHSIVNGSHDVPFFVSRFREALFHYSAVFDMLDSNLDREDPSRLMFEKELFGQEIMNIIACEGCERIERPQTFKQWQLHNMRIGFRLLPLNQRVIDRLKKRLRDDAHNTNFMLEVDGDWVLQGWKGRILHASSCWIPA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01647 302 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 293 IPR005202 -
Phco10g01647 302 Pfam GRAS domain family 2 299 IPR005202 -
Phco10g01647 302 ProSiteProfiles GRAS family profile. 1 300 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01647 Phco-Chr10 39144665 39145573 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco10g01647 GRAS 7e-89 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01647 10 39144665 39145573 Phco10g01647 10 39144665 39145573 ECH
Phco10g01647 10 39144665 39145573 Phco9g00714 9 5273378 5276200 PCT
Phco9g00713 9 5269819 5272152 Phco10g01647 10 39144665 39145573 PCT