Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00656 ATGGAAGCAGCGTGTACCACGATTCTGATGCTGATTCTGATACTGCTTCTGACATGGGCATGGATGATGCTAAATTGGTTATGGTTCACTCCAATGAGGCTTGAAAGGCTTCTCAGAGAGCAAGGTCTTCAAGGCAATCCATATACGCTTTTGGTTGGAGACACCAATGAGTTTGCGAAGATGAGAAAGGAAGCCTTCTCCAAACCAATGAATCTCTTCTCTCACGACATAGTGCCGCGTGTGTTTTCCTTTTCCCATCACACTATCAACACACATGGCAAAAATTCTTTTATTTGGTTTGGACCGGTACCAAGGGTGACCCTCACTGATCCAGAGCTAATCAAAGATGTATTTAACAAGACATATGACTTCCATAAGATTAATATGAATCCACAAATCTGGTTACTAGGTCCTGGCCTTCTAAGCCACCACGGAGAAAAGTGGAGCAAACACAGAAAGATAATTAATCCTGTTTTCAATTTAGAGAAGTTGAAGAATATGTTACCACTATTCATCAAAAGTTGTGATGATCTTATTAGCAAATGGGAGGAAATGTTTTCTTCAGATGGATCAAGTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGACTAGTGACGCTATTTCACGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGAAGAATATTTCAACTCCTAAAAGAGCAAAGTGAACTTACAGTGCAACTTATGTTGGAAGTTTACATCCCGGGATGGAGGTTTGTACCCACTGCTACCAACAGAAAGATGAACGCAATTGACAGGAAAATAAAAGCTTCACTTATGGATATTATTAACAGCAGAGAGAAAGCACTAAAAGCGGGTGAAGCCAGTAAAAATTATTTGTTAGATACACTTCTGGAGTCAAATCAGAAGGAAATTCAAGAACAGGGAAACAATAAGAATGTTGGAATGAATATTGAAGATGTTATTGGGGAATGCAAGCTATTTTACTTTGCAGGGCAGGAAACCACTTCATCTTTGCTTGTTTGGACGATGATATTATTAAGTATGTACCCTGTTTGGCAAACAGGTGCAAGGGAGGAAGTCTTACAAGTTTTTGGCAATGGAAAACCAGATTTTGATGGATTGAATCACCTTAAGATTGTTACCATGGTTTTGAATGAGGTTCTTAGGCTATACCCACCAATAATTGGTCTTTCTCGAGAAGTTTGTAAGGATGTGAAACTTGGAAACCTATCATTAGCTTCTGGAATGCAAGTTTACATATCAATAATTTTGGTTCACCATGATTGTGAGCTCTGGGGTGATGACGCTAAGGAGTTCAAACCTGAAAGATTTGCTGATGGAGTTCTAAAGGCTACAAATGGCAAAGTTGCACTATTTCCCTTTGGATGGGGTCCTAGGATATGCATTGGACAAAACTTCTCCTTGTTGGAAGCAAAGGTTGCTTTGTCAATGATTTTACAACATTTCTCGTTTGAACTCTCTCCTACCTATACCCACGCTCCAACTACTGTGATTACCCTTCAACCCCAGTATGGTGCTCAACTCATTTTACGTAAACTAGAAAATATGAATAAATAA 1569 0.3926 MEAACTTILMLILILLLTWAWMMLNWLWFTPMRLERLLREQGLQGNPYTLLVGDTNEFAKMRKEAFSKPMNLFSHDIVPRVFSFSHHTINTHGKNSFIWFGPVPRVTLTDPELIKDVFNKTYDFHKINMNPQIWLLGPGLLSHHGEKWSKHRKIINPVFNLEKLKNMLPLFIKSCDDLISKWEEMFSSDGSSEMDVWPFLQNLTSDAISRTAFGSSYEEGRRIFQLLKEQSELTVQLMLEVYIPGWRFVPTATNRKMNAIDRKIKASLMDIINSREKALKAGEASKNYLLDTLLESNQKEIQEQGNNKNVGMNIEDVIGECKLFYFAGQETTSSLLVWTMILLSMYPVWQTGAREEVLQVFGNGKPDFDGLNHLKIVTMVLNEVLRLYPPIIGLSREVCKDVKLGNLSLASGMQVYISIILVHHDCELWGDDAKEFKPERFADGVLKATNGKVALFPFGWGPRICIGQNFSLLEAKVALSMILQHFSFELSPTYTHAPTTVITLQPQYGAQLILRKLENMNK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00656 522 CDD CYP72 82 513 - -
Phco10g00656 522 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 510 - -
Phco10g00656 522 Gene3D Cytochrome P450 71 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 Pfam Cytochrome P450 84 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 SUPERFAMILY Cytochrome P450 78 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00656 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Phco10g00656 522 FunFam Cytochrome P450 734A1 28 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00656 Phco-Chr10 7639162 7641642 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00656 10 7639162 7641642 Phco10g00656 10 7639162 7641642 ECH