Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00648 ATGGAAGCAGCATGGACCACAACTCTGACTCTCATAGTGATACTTCTTCTGATAGGGGCATGGAAGATTCTGAACTGGTTATGGTTCAATCCAAAGAGACTTGAAAAGCTCCTAAGAGAGCAAGGTTTTCAAGGCAATCCATACAAGCTTTTGTTTGGAGACAGCAAGGAGTTTCTCAAGATGAGAAAGGAAGCCTTATCAAAACCCATGGATCTCTCTGATGACATAGTTCCACGTGTCTCTTCCTATATCCATCACAGTGTCAACTCACATGGTAAGAATTCTTTTATCTGGTTAGGACCATCGCCAAGGGTGACTATCTTAGATCCAGAGCAAATCAAAGATGTATTTAACAAGATCTATGACTTCCCAAAGCCTAATACAAATCCACTTATCAAGTTACTAGCAACTGGCCTTGCAAGCTATAAAGGAGAAAAGTGGAGCAAGCACAGAAGGTTAATCAACTCTGCTTTCAATTTAGAAAAATTAAAGACAATGTTACCATTATTCTTCGAAAGTTGCAATGATCTGGTTAGCAATTGGGAAGGAATGTTGTCTTCAAACGGATCATGTGAAATAGATGCATGGCCTTTCCTTCAGAATCTGACTAGTGATGTTATCGCTCGATCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAACTAAACTTGTAATGCAAGTTATATTAAAAATTCAAATCCCCGGATGGAGGTTTTTACCTACTAAAACCCATAGGAGAATGAAGGAAATTGACAGAGATATAAAAGCTTTGTGTAAGGATATGATTTACAAAAGGGAGAAAGCACTAAAGGCGGGTGAAGCCATTAATGATGACCTATTAGGCATACTTTTAGAGTCCAATCACAAGGAAATTCAAGAACATGCAAAGGGAGACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGAAGGAAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTATTGAGTAGGTACCCTGATTGGCAAGAACGTGCAAGGGAGGAAGTCTTGCAAGTCTTTGGCAATCAAAAGCCAGATTTTGATGGTTTAAATCGCCTAAAGATTGTAACTATGATTTTGAATGAGGTTCTTAGATTATATGCACCAGTACTTGGGATGACTCGACTTGTTCAAAGAGATATTAAACTTGGAAACATAACTTTACCTGCTGGAGTGTTGATTTTCCTCCCAACTGTTTTGGTTCACCATGAGTGTGAATTCTGGGGTGAAGACGCTAAGCAGTTCAATCTTGAGAGATTTTCTGAAGGAGTTCTAAAAGCAACAAATGGTAGAGTTTCATTTTTCCCTTTTGGATGGGGTCCTAGAATTTGCATTGGACAAAACTTCTCCTTATTGGAAGCAAAGATGGCTTTGTCAATGGTTTTACAACATTTCTCATTTGAACTTTCTCCAGCATATGCTCATGCTCCAGCTATGTCAATCACTCTTCAAGCACATAAAGCTTATAATGCGTATGGGGTTAGCATGCTCCCCACCCTCAACGTAACCGGCGACATCCTCCTCGCCGACCACCTCTCCCCGCTGCTCGGGAACGTCGGGCACGGCTACTTGGTTCTCGTTCGGTCCCCTCTCAACCCTAAGATCAGGTTGACGAAGCGCGTCGTGGCCATGGAAGGGGACACCGTCACTTACTTCGACCCTATGCACTCTGAGGCTTCTCAAGTTGCAGTGGTGTGTGTGCTTAATGGGATTTCCCTTATGGATTGTGATTAG 1800 0.4133 MEAAWTTTLTLIVILLLIGAWKILNWLWFNPKRLEKLLREQGFQGNPYKLLFGDSKEFLKMRKEALSKPMDLSDDIVPRVSSYIHHSVNSHGKNSFIWLGPSPRVTILDPEQIKDVFNKIYDFPKPNTNPLIKLLATGLASYKGEKWSKHRRLINSAFNLEKLKTMLPLFFESCNDLVSNWEGMLSSNGSCEIDAWPFLQNLTSDVIARSAFGSSFEEGRRIFQLQREQTKLVMQVILKIQIPGWRFLPTKTHRRMKEIDRDIKALCKDMIYKREKALKAGEAINDDLLGILLESNHKEIQEHAKGDNKNVGMSLEDVIEECKLFYFAGKETTSVLLVWTMVLLSRYPDWQERAREEVLQVFGNQKPDFDGLNRLKIVTMILNEVLRLYAPVLGMTRLVQRDIKLGNITLPAGVLIFLPTVLVHHECEFWGEDAKQFNLERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSMVLQHFSFELSPAYAHAPAMSITLQAHKAYNAYGVSMLPTLNVTGDILLADHLSPLLGNVGHGYLVLVRSPLNPKIRLTKRVVAMEGDTVTYFDPMHSEASQVAVVCVLNGISLMDCD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00648 599 Pfam Cytochrome P450 86 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 SUPERFAMILY Cytochrome P450 81 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 CDD CYP72 82 506 - -
Phco10g00648 599 Gene3D Cytochrome P450 76 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00648 599 SUPERFAMILY LexA/Signal peptidase 510 574 IPR036286 -
Phco10g00648 599 Pfam Signal peptidase, peptidase S26 501 574 IPR019533 GO:0004252|GO:0006465
Phco10g00648 599 CDD S26_SPase_I 515 569 IPR019533 GO:0004252|GO:0006465
Phco10g00648 599 FunFam Cytochrome P450 734A1 28 518 - -
Phco10g00648 599 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Phco10g00648 599 Gene3D Umud Fragment, subunit A 516 587 - -
Phco10g00648 599 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00648 Phco-Chr10 7506753 7514610 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00648 10 7506753 7514610 Phco10g00648 10 7506753 7514610 ECH