Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00647 ATGGTGGTATCTTCCACAACTACCACATGGTTCCTCGTATTGGTGCCTGTGGTGGTGCTATGGTTGTGGAAGCTAGTGAACTGGGTGTGGCTGAGGCCAAAGAGAATGGAGAAGCTTCTGAGAGAACAGGGCCTTCAGGGAAACCCCTACAGGCTCTTGGTTGGAGACACAAGGGAAATGTTTACAGTGCTCGTGAAAGCCGCAAAATCTCAACAATCCATGACTTTTCTCTCTGATGACAAGGACATGGCACCGCATATCACAACCTTTAACCATCACATTGTCCAAAAATTTGGCAAAAATTCATTTTTATGGGAAGGTCCCATGCCGAAAGTGATTATCATGGATCCAGAGCAAATCAAAGAAGTCTTCAACAAGTTCCAAGACTTTGAGAAGCCTAAGTTGAGCCCCATTTTCAAATTGTTAGGTACTGGACTTGCAAATTTAGAAGGGGAGAAATGGAAGATGCATCGAAAGATTATCAACCCTGCTTTCCATTTAGAAAAACTGAAGGTTATGTTACCAATATTTTTTGAATGTTGCGATGATATGATTTCGAAATGGGAAGTGATGCTGTCTACAGAGGAGAAATGTGAAGTTGACGTGTGGCCTTTCCTTCAAAATTTGACCTGTGATATTATTTCTAAAACAGCATTTGGAAGCAGTTATGAAGAAGGCAAAGAAATATTTGAACTTCTGAAAGAGCAAGCAGGACTTATTATGAGATCACAGAAAGTTTATTTTCCAGGGTCCTGGTTGTTACCAACAGCTAGAAATAGGAGGATGAAAGCAATTGATACCAATATACGAGGATTACTTAAAGGTATCATTAACAATCGAGAGAAAGCAATGAAGGGTGGTGATGTTATGAAGCATGACTTGTTGGGGATGCTTTTGGAATCAAACCATGCAGAAATGCTTGAAAATAGAAACAAGAAGAGCCTTGCAATGAGTAGTCAAGAGGTAATTGAGGAGTGCAATGCATTCTACATAGCTGGGCAAGAAACTACAGCGGTTTTGCTGGTTTGGACAATGGTGTTGTTGAGTAGGCATCCTGAGTGGCAATCACGTGCTAGAGAGGAAGTGTTGCATGCTTTTGGTAACCAAAAGCCAGACTATAATGGCTTAAGTCACCTCAAAGTTGTGAGCATGATTTTGTACGAGGTTCTCAGGTTATATCCACCTTTAGTTTATTTCAGTCGAAGTACCAAGAATGATGTCAAACTTGGAGACCTTTCTCTACCTGCAGGACTGCAAGTTTCCATACCGATATTGTTGATTCACCAGGATCCTAATATTTGGGGTGATGATGCTACTGAGTTCAAACCAGAAAGATTTGCTGAAGGGGTGGCAAAGGCAACAAAAGGCCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAGTGTGCCTTGGCCAAAATTTTGCTCTATTAGAAGCAAAGTTGATTTTGTCTTTACTTTTGCAACGTTTCTCCTTTGAGATTTCTCCAACCTATGCACATGCTCCAGTCACTGTGTTCACTCTTTATCCAAAACATGGGGCTCATATGATCTTACAAAAGCTCTAG 1569 0.4111 MVVSSTTTTWFLVLVPVVVLWLWKLVNWVWLRPKRMEKLLREQGLQGNPYRLLVGDTREMFTVLVKAAKSQQSMTFLSDDKDMAPHITTFNHHIVQKFGKNSFLWEGPMPKVIIMDPEQIKEVFNKFQDFEKPKLSPIFKLLGTGLANLEGEKWKMHRKIINPAFHLEKLKVMLPIFFECCDDMISKWEVMLSTEEKCEVDVWPFLQNLTCDIISKTAFGSSYEEGKEIFELLKEQAGLIMRSQKVYFPGSWLLPTARNRRMKAIDTNIRGLLKGIINNREKAMKGGDVMKHDLLGMLLESNHAEMLENRNKKSLAMSSQEVIEECNAFYIAGQETTAVLLVWTMVLLSRHPEWQSRAREEVLHAFGNQKPDYNGLSHLKVVSMILYEVLRLYPPLVYFSRSTKNDVKLGDLSLPAGLQVSIPILLIHQDPNIWGDDATEFKPERFAEGVAKATKGQVSFFPFGWGPRVCLGQNFALLEAKLILSLLLQRFSFEISPTYAHAPVTVFTLYPKHGAHMILQKL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00647 522 FunFam Cytochrome P450 734A1 30 522 - -
Phco10g00647 522 Gene3D Cytochrome P450 22 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 SUPERFAMILY Cytochrome P450 85 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 CDD CYP72 90 518 - -
Phco10g00647 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Phco10g00647 522 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco10g00647 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 515 - -
Phco10g00647 522 Pfam Cytochrome P450 91 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00647 Phco-Chr10 7453103 7455764 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00647 10 7453103 7455764 Phco10g00647 10 7453103 7455764 ECH
Phco9g01807 9 42155438 42158065 Phco10g00647 10 7453103 7455764 PCT