Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00641 ATGGATATGACGGAAGTTTCAATCTTGCACCATGTGGGGATTGTGCTGATTGCGATTTGGATTCTCTCTGCATTCAATTGGTGCCACTCTGTTGTTTATTTTGTAGCTCTGGTCTATCTTTTTCTGGTTCATGAGCGTTATGTTACGAGGCTGCGGAAGAAGTTGCAGTTCGAAGAGAGAAAACAAGCTAATCAAAGAAGGGTGCTTTCAGATTCTGAAACAGTCCGGTGGTTGAACCATGCAGTTGAAAAGATATGGCCTATATGTATGGAACAGATTGCCTCTCAGAAGATATTATTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAGGAAGCTGTTGTTCAGCAGCTATACCTGGGGAGAAACCCACCTTTGTTTACTGAAATTAGGGTTCTTCGCCAGACTGAGGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTTACTGCTGATGATATGAGTGCAATACTTGCTGTCAAACTAAGGAAAAGATTGGGGTTTGGAATGTGGGCAAAACTGCACATTACAGGAATGCATATTGAAGGGAAGATATTAGTTGGGGTAAAATTTCTACCGACATGGCCTTTTCTTGGCCGTTTGCGTGTATGCTTTGTTGAACCTCCATATTTTCAAATGACTGTCAAACCTATGTTTACTCATGGGCTTGATGTAACTGAACTTCCAGGCATTGCTGGGTGGCTAGATAAAATGCTGTCTATTGCTTTTGAACAGACCCTTGTTGAGCCCAATATGCTGGTTGTTGATGTTGAGAAATTTGTTTCGTCAGAGCAAGAGTATTGGTTCTCTGTGGATGAGAAGGAGCCTGTTGCTTATGCTAAAGTAGAAGTTATTGAAGCATCTGAGATGAAGCCATCAGATCTAAATGGATTAGCGGATCCTTATGTGAAAGGTCATATGGGTGGATACAGATTTAGGACAAAAGTACAAAGGAAAACACTTTCTCCAAAATGGCATGAGGAATTTAAGATTCCCATCATAACATGGGAGTCTGATAATCTGCTGGTTATTGCAGTTCGTGACAAGGACCATTTCTATGATGATATCCTTGGGGACTGTTCTGTGAACATCAACGAATTTAGGGATGGCCATAGACATGATATGTGGCTGCAACTTGAGAACATGAAAATGGGGAGGCTGCGTTTGGCAATAACTATTTTTGAAGCTAATGGAAAGGGAGTTGATACTGCAAGTGAAATGGACTTTAAAGTACCAAAAAACTCATCGGCAGCTCATAACACTACTGATAATAGTTCCTTTTCACCTGTTCCACCTGAAAAATCTCAGAAGTTGGCAGATAACTATGAGCCTATAGACATTGAAGGGCAAAAGGAGACAGGAATTTGGGTTCATCACCCAGGAAGTGAAGTTTTCCAAAGGTGGGAGCCTAGGAAAGGGAAGAGTCGGCGAATGGATACTGAAATTCATGGAGAACCTAATGATTTAGTTGGTAGCGGTAGTTCAACTGGATCTGGATCCTTGAACAATGACAGCAGCAGTTCTGATAATAATAATCCTGAAGAAAAGCACCGAATGAGATCGGTTAGGAGGGGCCTGCACAAGATTGGTTCAGTATTCCACCGAAGTAAAAGGGAGGAGCCTGTTGGAGAGGACATTCCATCTCCACATGATAACATTAGGTCAATGAATTCTAAGGGGATGATTGGTGTGCAGTTTGTGATGGATGAGAACATTTCTGACTTTCCAACTCCTAAGGCTCAGGTAGAAGGGGGATCAAATGAAGGGAGTGGTCCTGAAAGCCCTGCAAAGGGACATGTCAAGGATATGGCAAAGCATATTTTGAAACATGCAGAAAAATCAGCTCGAGGCTTGAGACATGTTCTTTCTTGCAAGTCAAGGAAATCTAAAGATGAGTCTCTAGCAGTTCCAGAAAGAGTAAATGAATCTGATTCTTCAGAAGATGAATCTAACGCAGTTCAGTCTCCCACAGTTGCAACAACTCCAGTTGGTTCTCAGGCTATGACCCCAGGCAGCAATGATTTCCCCCTTTCTAGGGTGCAGGTGGTTCAAACAGTTCCATCTAACACTCATGAGGATAATGAAGCACCAAGGAAGATAGTTAATGTAAAAGATGACCCTGAAAAGGCATGCTACCCTGAAAGGCCAAGTGAAGAGTTTGTTAAATCTGATGAATTGGAGCATGTTAAAGAGGAAATTGTGGGCAGATAA 2229 0.4199 MDMTEVSILHHVGIVLIAIWILSAFNWCHSVVYFVALVYLFLVHERYVTRLRKKLQFEERKQANQRRVLSDSETVRWLNHAVEKIWPICMEQIASQKILFPIIPWFLEKYKPWTAKEAVVQQLYLGRNPPLFTEIRVLRQTEDDHLVLELGMNFLTADDMSAILAVKLRKRLGFGMWAKLHITGMHIEGKILVGVKFLPTWPFLGRLRVCFVEPPYFQMTVKPMFTHGLDVTELPGIAGWLDKMLSIAFEQTLVEPNMLVVDVEKFVSSEQEYWFSVDEKEPVAYAKVEVIEASEMKPSDLNGLADPYVKGHMGGYRFRTKVQRKTLSPKWHEEFKIPIITWESDNLLVIAVRDKDHFYDDILGDCSVNINEFRDGHRHDMWLQLENMKMGRLRLAITIFEANGKGVDTASEMDFKVPKNSSAAHNTTDNSSFSPVPPEKSQKLADNYEPIDIEGQKETGIWVHHPGSEVFQRWEPRKGKSRRMDTEIHGEPNDLVGSGSSTGSGSLNNDSSSSDNNNPEEKHRMRSVRRGLHKIGSVFHRSKREEPVGEDIPSPHDNIRSMNSKGMIGVQFVMDENISDFPTPKAQVEGGSNEGSGPESPAKGHVKDMAKHILKHAEKSARGLRHVLSCKSRKSKDESLAVPERVNESDSSEDESNAVQSPTVATTPVGSQAMTPGSNDFPLSRVQVVQTVPSNTHEDNEAPRKIVNVKDDPEKACYPERPSEEFVKSDELEHVKEEIVGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00641 742 Gene3D C2 domain 266 402 IPR035892 -
Phco10g00641 742 SMART C2_3c 285 382 IPR000008 -
Phco10g00641 742 MobiDBLite consensus disorder prediction 472 560 - -
Phco10g00641 742 Pfam C2 domain 287 385 IPR000008 -
Phco10g00641 742 MobiDBLite consensus disorder prediction 604 652 - -
Phco10g00641 742 MobiDBLite consensus disorder prediction 653 697 - -
Phco10g00641 742 MobiDBLite consensus disorder prediction 538 553 - -
Phco10g00641 742 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 277 401 IPR035892 -
Phco10g00641 742 MobiDBLite consensus disorder prediction 581 714 - -
Phco10g00641 742 CDD C2 287 385 - -
Phco10g00641 742 MobiDBLite consensus disorder prediction 698 714 - -
Phco10g00641 742 MobiDBLite consensus disorder prediction 420 438 - -
Phco10g00641 742 MobiDBLite consensus disorder prediction 472 490 - -
Phco10g00641 742 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Phco10g00641 742 MobiDBLite consensus disorder prediction 419 443 - -
Phco10g00641 742 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 708 - -
Phco10g00641 742 MobiDBLite consensus disorder prediction 495 515 - -
Phco10g00641 742 CDD SMP_SF 95 262 - -
Phco10g00641 742 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00641 Phco-Chr10 7378567 7384271 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00641 10 7378567 7384271 Phco10g00641 10 7378567 7384271 ECH