Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00498 ATGGAGGAGACGGGCGGCACACCCCGCCGGAGGGAACCACTTCTGACGTCAGCGGAGGGAGAGGTTGCAAAGGCTTCGTGGAGACTTAACTTGAATGAGTTTCGTTTGCCAAGCCAAACAGATGATCATCAACGTAAACGACCCTTCACTTTTCACAGCCTTCTTCGTAAACCAAGGAAGCAACGGAAAGTGGCAGAATATTACAAGCAGCAGAAGAGACTCCTTGAAGGATTTACTGAGATGGAGACCATAACTGAAACGGGTGGTTTCCCTGGAGCTCTCTCTGAGGATGAAATGAAGCTACTAGCAAAGAGTGAGAGGATGGCTATTCATGCCTCAAATATTTGTAACTTGGTGCTGTTTGCTGCAAAGGTTTATGCCTCAATTGCGAGCAGATCATTGGCAGTCATTGCCTCAACCATGGATTCTCTCTTGGATCTCTTGTCAGGGTTCATCTTATGGTTTACTGCTCATGCCATGAAAAACCCAAACCAATATCACTATCCAATTGGAAAGAAACGCATGCAGCCAGTGGGTATCATTGTTTTTGCATCAGTAATGGCAACTTTGGGGTTGCAGATTTTGATTGAATCTGCCCGAGAACTTATTTCCAAGTCTAAGCCTAACATGGATCCAACAAAACTACATTGGATGATCGGGATTATGGTGGGTGTGACTATAGTGAAGTTCATTCTCATGGTCTACTGCAGAAGATTTAAAAATGAAATCGTTAGAGCGTATGCACAAGATCACTTTTTTGATGTGATTACTAATTCTGTTGGATTAGCTGCTGCTGTTCTAGCTGTCAAGTTCTACTGGTGGATTGATCCAACAGGAGCTATAATTATAGCATTGTATACAATTAACACATGGGCCAGGACAGTGGTTGAGAATGTTTGGTCACTCATTGGAAGGACAGCACCACCTGATTTTCTGGCCAAGTTAACTTACCTCATATGGAATCACCATGAGCAGATTAAGCACATAGATACTGTTAGAGCATACACCTTTGGTGCACATTACTTTGTGGAAGTTGACATTGTGTTGCCAGAAGACATGGTTCTCCATCAAGCACACAACATTGGTGAGACACTCCAGGAGAAGCTAGAGCAACTTCCAGAAGTTGAGAGGGCTTTTGTGCACATAGATTTTGAGTTCACTCACAGGCCAGAGCACAAGACCATGGTGTGA 1191 0.4391 MEETGGTPRRREPLLTSAEGEVAKASWRLNLNEFRLPSQTDDHQRKRPFTFHSLLRKPRKQRKVAEYYKQQKRLLEGFTEMETITETGGFPGALSEDEMKLLAKSERMAIHASNICNLVLFAAKVYASIASRSLAVIASTMDSLLDLLSGFILWFTAHAMKNPNQYHYPIGKKRMQPVGIIVFASVMATLGLQILIESARELISKSKPNMDPTKLHWMIGIMVGVTIVKFILMVYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAVLAVKFYWWIDPTGAIIIALYTINTWARTVVENVWSLIGRTAPPDFLAKLTYLIWNHHEQIKHIDTVRAYTFGAHYFVEVDIVLPEDMVLHQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKTMV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00498 396 FunFam Metal tolerance protein 11 305 385 - -
Phco10g00498 396 Gene3D Cation efflux protein, cytoplasmic domain 307 384 IPR036837 -
Phco10g00498 396 Pfam Cation efflux family 112 302 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phco10g00498 396 FunFam Metal tolerance protein 11 109 302 - -
Phco10g00498 396 Pfam Dimerisation domain of Zinc Transporter 309 383 IPR027470 -
Phco10g00498 396 Gene3D Cation efflux protein transmembrane domain 107 302 IPR027469 -
Phco10g00498 396 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 21 393 - -
Phco10g00498 396 SUPERFAMILY Cation efflux protein transmembrane domain-like 105 304 IPR027469 -
Phco10g00498 396 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 383 IPR036837 -
Phco10g00498 396 NCBIfam cation diffusion facilitator family transporter 111 383 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00498 Phco-Chr10 5112869 5116109 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00498 10 5112869 5116109 Phco10g00498 10 5112869 5116109 ECH
Phco10g00498 10 5112869 5116109 Phco9g01959 9 44413751 44424480 PCT