LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco10g00495	ATGGTCATGGAAACAAGAAGAGTGAGAAAGAGTCTTATGATACTTCTCCTCTACCTCACTTTCTCTGCCATTTCTCTCACCCAATGTGATGCAGATAGATCAATAGTGAGGCTATTGAGAGGCCCTAAAGATAAAAGAAATTCAACCAACAAAAACCCAAAGAAGTTGAAAACAGTTAAGCATTTAGATGAGAATCCAACCATTTTCTCATCAAATGTAGAACCCTATAGTCTTAGCTCCCCATTCTCTTTGCCCCCTTATGACTCACTGGCTCCAATCCCACTGCCAGAAAACAGCCCTCCATTTTGTGTGTTCCCACCACCAGGTACTCCTTCCACCACCATGCCTACCCCCACAGGCTTTCAACCCACAACTCCATCACCACCTGACTTTTACACCTCACCGGTTCTCCCAACTCAAAACCCACCTCCAAACCCCCTAATCATAACACCAGGCCCACCAGATTCTTTCCCCACACCAACCCCCGAAATTGTTCCAGGCCCACCTACTATCACGCCCGGCTCGCCTGAGCCCGTGCTCAATCCTCCCATCATTATCCCAAGCCCACCTGACTCCTCAATGGGCCCACCTTACTTTGAGCCCAGTCCACCCTACTTTGAGCCCACCCCACCTTTCATAATCCCTTCCCCCACAGGTGGCATTACCCCAGGCCCACCAACCATAATCCCTTCCCCCACAGAAGGCACTCTCCCAAGCCCACCAAGCACTGTGCCATCCCCCAGTGAAGGCACCATCCCTAGCCCAGGTGTGTTTCAGCCACCTGTGGTGTTCCCTCCACCAAGTGTGCCACCACCACCCAACTATGCCCCAAGGACCACCTTGTGGTGTGTGGCTAAGCCCTCAGTTCCTGACCCAATCATCCAAGAGGCCATGAATTATGCTTGCTGGTCAGGAGCAGATTGCACCTCAATTCAGCCCAATGGGCCCTGCTATCAGCCCGATACTGTCTATGCACATGCTTCATATGCTTTCAATAGTTATTGGCAAAGGACTAAAGGTGCTGGAGGCAATTGCGAGTTTGGAGGGACAGCCATGCTAGTTGCTGTTGACCCTAGCTTCGATGGGTGTCACTTCATCTACAACTGA	1107	0.5095	MVMETRRVRKSLMILLLYLTFSAISLTQCDADRSIVRLLRGPKDKRNSTNKNPKKLKTVKHLDENPTIFSSNVEPYSLSSPFSLPPYDSLAPIPLPENSPPFCVFPPPGTPSTTMPTPTGFQPTTPSPPDFYTSPVLPTQNPPPNPLIITPGPPDSFPTPTPEIVPGPPTITPGSPEPVLNPPIIIPSPPDSSMGPPYFEPSPPYFEPTPPFIIPSPTGGITPGPPTIIPSPTEGTLPSPPSTVPSPSEGTIPSPGVFQPPVVFPPPSVPPPPNYAPRTTLWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYQPDTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGCHFIYN	368

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco10g00495	368	MobiDBLite	consensus disorder prediction	230	251	-	-
	Phco10g00495	368	SMART	X8_cls	281	365	IPR012946	-
	Phco10g00495	368	MobiDBLite	consensus disorder prediction	230	248	-	-
	Phco10g00495	368	Gene3D	-	277	364	-	-
	Phco10g00495	368	MobiDBLite	consensus disorder prediction	112	133	-	-
	Phco10g00495	368	Pfam	X8 domain	281	352	IPR012946	-
	Phco10g00495	368	FunFam	Glucan endo-1,3-beta-glucosidase 4	276	368	-	-
	Phco10g00495	368	PANTHER	BETA-1,3 GLUCANASE	278	365	IPR044788	-
	Phco10g00495	368	PRINTS	Proline rich extensin signature	150	167	-	-
	Phco10g00495	368	PRINTS	Proline rich extensin signature	107	128	-	-
	Phco10g00495	368	PRINTS	Proline rich extensin signature	169	194	-	-
	Phco10g00495	368	PRINTS	Proline rich extensin signature	78	94	-	-
	Phco10g00495	368	PRINTS	Proline rich extensin signature	131	147	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco10g00495	Phco-Chr10	5062792	5064461	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco10g00495	10	5062792	5064461	Phco10g00495	10	5062792	5064461	ECH