Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00293 ATGGCCACTCTTGTTCTTCATCATCAAACTTCTCCTGCTCAAGATGCTGAAGCTCTTCATCAAGCTTTCAAAGGATGGGGTTCTGATGGCAAGGCCATTATAGCAATACTGGGTCACAGAAATGTTCATCAGAGACAGGAGATCAGAAAGGCTTATGAAGAGATTTACCAAGAGAATCTCATCAAACGTCTTGAGTCTGAGATCTCTGGTGATTTTGAGAGAGCTGTGTATCGGTGGATGTTGGAGCCTGCAGATCGTGATGCTGTTTTGATTAATGTAGCAATCAAGAATGGTCCTAAAGAGTACCATGTGATTGCAGAGATTTCCAGTGTTCTTTCAGCTAAAGAACTCTTGGCAGTGAGGTCTGCTTATCATGATCGCTACAAACGTTCCATGGAAGAAGATGTAGCAGCTCACACCACTGGCCATCTTCGTCAGCTTTTGGTTGGGTTGGTGAGTTCATATAGGTATGAAGGTGATGAAATCAATGTAAAATTGGCACAAACTGAAGCTAATATTCTTCATGAATCAATTAAGGAGAAGAAAGCCAACCATGAAGAAGTTATCAGAATTCTTACCACAAGAAGCAAAACTCAACTTGTAGCAACCTTCAACCGCTATAGAGATGAGCATGGAATTTCCATCACTAAGAAATTGGTGGATCAGTCATCTGATGATTTTGTCAAGGTATTGCACACAGTGATTCGCTGCATCAATGACCCCAAGAAATACTATGAGAAGGTTTTGCGCAATGCAATAAAAAAATTTGGAACTGATGAGGATGGGTTGACTCGTGTGATTGTGACAAGGGCTGAGAAAGATTTGAAGGATATCAAGGAGATCTACTACAAAAGGAACAGTGTTCATCTTGAAGATGATGTTTCCAAGGAAATCTCAGGAGACTACAAGAAGTTCATCCTCACTCTGCTGGGGAAGCAAGATTAA 945 0.4106 MATLVLHHQTSPAQDAEALHQAFKGWGSDGKAIIAILGHRNVHQRQEIRKAYEEIYQENLIKRLESEISGDFERAVYRWMLEPADRDAVLINVAIKNGPKEYHVIAEISSVLSAKELLAVRSAYHDRYKRSMEEDVAAHTTGHLRQLLVGLVSSYRYEGDEINVKLAQTEANILHESIKEKKANHEEVIRILTTRSKTQLVATFNRYRDEHGISITKKLVDQSSDDFVKVLHTVIRCINDPKKYYEKVLRNAIKKFGTDEDGLTRVIVTRAEKDLKDIKEIYYKRNSVHLEDDVSKEISGDYKKFILTLLGKQD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00293 314 Gene3D Annexin 241 312 IPR037104 GO:0005509|GO:0005544
Phco10g00293 314 ProSiteProfiles Annexin repeat profile. 165 236 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 FunFam Annexin 165 239 - -
Phco10g00293 314 ProSiteProfiles Annexin repeat profile. 240 311 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 FunFam Annexin 82 152 - -
Phco10g00293 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Phco10g00293 314 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Phco10g00293 314 PRINTS Annexin family signature 173 199 IPR001464 GO:0005509|GO:0005544
Phco10g00293 314 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Phco10g00293 314 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Phco10g00293 314 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Phco10g00293 314 FunFam Annexin 1 81 - -
Phco10g00293 314 ProSitePatterns Annexin repeat signature. 257 309 IPR018252 GO:0005509|GO:0005544
Phco10g00293 314 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Phco10g00293 314 PANTHER ANNEXIN 12 309 - -
Phco10g00293 314 Gene3D Annexin 164 239 IPR037104 GO:0005509|GO:0005544
Phco10g00293 314 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 FunFam Annexin 240 312 - -
Phco10g00293 314 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 SUPERFAMILY Annexin 3 314 IPR037104 GO:0005509|GO:0005544
Phco10g00293 314 PRINTS Plant annexin signature 160 180 IPR009118 -
Phco10g00293 314 PRINTS Plant annexin signature 225 243 IPR009118 -
Phco10g00293 314 PRINTS Plant annexin signature 118 132 IPR009118 -
Phco10g00293 314 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 SMART annex3 184 234 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 SMART annex3 257 309 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 SMART annex3 98 151 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 Pfam Annexin 247 309 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 Pfam Annexin 171 232 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 Pfam Annexin 87 151 IPR018502 GO:0005509|GO:0005544
Phco10g00293 314 Pfam Annexin 14 76 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00293 Phco-Chr10 2729290 2732372 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00293 10 2729290 2732372 Phco10g00293 10 2729290 2732372 ECH
Phco10g00293 10 2729290 2732372 Phco9g02205 9 47447312 47449990 PCT